Ppi_g13760


Description : not classified & original description: none


Gene families : OG0003321 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003321_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g13760

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00086p00132870 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AT3G47890 No alias Ubiquitin carboxyl-terminal hydrolase-related protein 0.06 OrthoFinder output from all 47 species
AT3G47910 No alias Ubiquitin carboxyl-terminal hydrolase-related protein 0.05 OrthoFinder output from all 47 species
Adi_g058350 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g080721 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g14795 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g04590 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g06801 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g18753 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g19280 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g32535 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g37626 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g22460 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g14015 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene43347.t1 Aspi01Gene43347 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0327.g065237 No alias not classified & original description: CDS=1-5397 0.05 OrthoFinder output from all 47 species
Ceric.1Z194000.1 Ceric.1Z194000 not classified & original description: pacid=50618972... 0.05 OrthoFinder output from all 47 species
Dac_g28933 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g04153 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dde_g07008 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
GSVIVT01008079001 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os03g06950.1 LOC_Os03g06950 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Lfl_g12618 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
MA_46922g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g13542 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g05015 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g02488 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g44266 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0022.g008734 No alias not classified & original description: CDS=269-5383 0.03 OrthoFinder output from all 47 species
Solyc06g071120.3.1 Solyc06g071120 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Spa_g14539 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g25851 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g50989 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g02198 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Zm00001e039017_P003 Zm00001e039017 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004843 cysteine-type deubiquitinase activity IEA Interproscan
BP GO:0016579 protein deubiquitination IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005049 nuclear export signal receptor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140142 nucleocytoplasmic carrier activity IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001394 Peptidase_C19_UCH 1437 1758
IPR006865 DUF629 362 925
IPR006866 DUF627_N 96 202
No external refs found!