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  5. Ppi_g13577

Ppi_g13577


Description : mRNA endoribonuclease *(G3BP) & original description: none


Gene families : OG0000432 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000432_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g13577

Target Alias Description ECC score Gene Family Method Actions
Adi_g034028 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g079968 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g108842 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g21637 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g23469 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g13869 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g04673 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g06941 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g16542 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g19869 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g31054 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.02 OrthoFinder output from all 47 species
Gb_35692 No alias mRNA endoribonuclease (G3BP) 0.02 OrthoFinder output from all 47 species
Len_g15747 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.02 OrthoFinder output from all 47 species
Len_g21624 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g17329 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.03 OrthoFinder output from all 47 species
Mp4g17080.1 No alias mRNA endoribonuclease (G3BP) 0.02 OrthoFinder output from all 47 species
Msp_g21351 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g11368 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g29164 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g08781 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g15548 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc06g083300.4.1 Solyc06g083300 mRNA endoribonuclease (G3BP) 0.03 OrthoFinder output from all 47 species
Zm00001e022613_P001 Zm00001e022613 mRNA endoribonuclease (G3BP) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
CC GO:0005681 spliceosomal complex IEP HCCA
CC GO:0005875 microtubule associated complex IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
CC GO:0030286 dynein complex IEP HCCA
MF GO:0032182 ubiquitin-like protein binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0043130 ubiquitin binding IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 344 401
IPR002075 NTF2_dom 17 135
No external refs found!