LOC_Os11g03794.1


Description : ALADIN scaffold nucleoporin of nuclear pore complex


Gene families : OG_01_0004325 (Archaeplastida) Phylogenetic Tree(s): OG_01_0004325_tree ,
OG_02_0004827 (LandPlants) Phylogenetic Tree(s): OG_02_0004827_tree ,
OG_03_0005573 (SeedPlants) Phylogenetic Tree(s): OG_03_0005573_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os11g03794.1
Cluster HCCA: Cluster_380

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00101p00091430 evm_27.TU.AmTr_v1... Protein translocation.nucleus.nucleocytoplasmic... 0.02 Archaeplastida
GSVIVT01025851001 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.03 Archaeplastida
Zm00001e039214_P001 No alias ALADIN scaffold nucleoporin of nuclear pore complex 0.02 Archaeplastida
AMTR_s00101p00091430 evm_27.TU.AmTr_v1... Protein translocation.nucleus.nucleocytoplasmic... 0.02 LandPlants
GSVIVT01025851001 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.02 LandPlants
Gb_13199 No alias ALADIN scaffold nucleoporin of nuclear pore complex 0.01 LandPlants
Mp5g23340.1 No alias ALADIN scaffold nucleoporin of nuclear pore complex 0.02 LandPlants
Pp3c11_18220V3.1 No alias Transducin/WD40 repeat-like superfamily protein 0.01 LandPlants
Smo136772 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.02 LandPlants
Zm00001e039214_P001 No alias ALADIN scaffold nucleoporin of nuclear pore complex 0.02 LandPlants
AMTR_s00101p00091430 evm_27.TU.AmTr_v1... Protein translocation.nucleus.nucleocytoplasmic... 0.02 SeedPlants
GSVIVT01025851001 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.02 SeedPlants
Gb_13199 No alias ALADIN scaffold nucleoporin of nuclear pore complex 0.01 SeedPlants
Zm00001e039214_P001 No alias ALADIN scaffold nucleoporin of nuclear pore complex 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR024977 Apc4_WD40_dom 105 180
IPR001680 WD40_repeat 261 282
IPR001680 WD40_repeat 205 242
No external refs found!