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  5. Ppi_g13288

Ppi_g13288


Description : subunit beta of TFIIf basal transcription factor complex & original description: none


Gene families : OG0005394 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005394_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g13288
Cluster HCCA: Cluster_239

Target Alias Description ECC score Gene Family Method Actions
Aop_g01636 No alias subunit beta of TFIIf basal transcription factor complex... 0.03 OrthoFinder output from all 47 species
MA_10429881g0030 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
BP GO:0006415 translational termination IEP HCCA
BP GO:0022411 cellular component disassembly IEP HCCA
BP GO:0032984 protein-containing complex disassembly IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR040450 TFIIF_beta_HTH 182 246
IPR040504 TFIIF_beta_N 21 130
No external refs found!