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  5. Ppi_g13218

Ppi_g13218


Description : not classified & original description: none


Gene families : OG0001264 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001264_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g13218

Target Alias Description ECC score Gene Family Method Actions
Adi_g015266 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g025138 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g056214 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g14246 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g06674 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g20831 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g21421 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g33458 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g22485 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g05242 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g21162 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene34200.t1 Aspi01Gene34200 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0003.g007864 No alias not classified & original description: CDS=1-924 0.04 OrthoFinder output from all 47 species
Cba_g24212 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.13G059700.1 Ceric.13G059700 not classified & original description: pacid=50635257... 0.02 OrthoFinder output from all 47 species
Ceric.1Z218900.1 Ceric.1Z218900 not classified & original description: pacid=50637330... 0.02 OrthoFinder output from all 47 species
Ceric.30G033300.1 Ceric.30G033300 not classified & original description: pacid=50608686... 0.02 OrthoFinder output from all 47 species
Dac_g16960 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g02773 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g04773 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g01659 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g08066 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g04145 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07402 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g15861 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g07968 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g11392 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0295.g027183 No alias not classified & original description: CDS=1-1983 0.03 OrthoFinder output from all 47 species
Tin_g09598 No alias PIP/PIPL precursor polypeptide & original description: none 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0000272 polysaccharide catabolic process IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016161 beta-amylase activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
CC GO:0042575 DNA polymerase complex IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
CC GO:0043625 delta DNA polymerase complex IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 363 391
IPR002885 Pentatricopeptide_repeat 85 114
IPR002885 Pentatricopeptide_repeat 120 149
IPR002885 Pentatricopeptide_repeat 221 270
IPR002885 Pentatricopeptide_repeat 290 339
IPR002885 Pentatricopeptide_repeat 465 512
IPR002885 Pentatricopeptide_repeat 151 200
IPR002885 Pentatricopeptide_repeat 395 444
No external refs found!