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  5. Ppi_g13205

Ppi_g13205 (RD21, RD21A)


Aliases : RD21, RD21A

Description : EC_3.4 hydrolase acting on peptide bond (peptidase) & original description: none


Gene families : OG0000056 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g13205
Cluster HCCA: Cluster_270

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00374p00013370 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.4 hydrolase... 0.02 OrthoFinder output from all 47 species
AT1G29080 No alias Papain family cysteine protease 0.03 OrthoFinder output from all 47 species
AT4G36880 CP1 cysteine proteinase1 0.02 OrthoFinder output from all 47 species
AT5G45890 SAG12 senescence-associated gene 12 0.04 OrthoFinder output from all 47 species
AT5G50260 No alias Cysteine proteinases superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g082069 XCP2 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene04262.t1 XCP1, Aspi01Gene04262 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Ceric.03G086100.1 Ceric.03G086100 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.04 OrthoFinder output from all 47 species
Ceric.04G044200.1 Ceric.04G044200 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Ceric.33G008600.1 Ceric.33G008600 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.02 OrthoFinder output from all 47 species
Cre05.g247851 XBCP3 Probable cysteine protease RD21B OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Ehy_g07466 RD21, RD21A EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
GSVIVT01007585001 No alias Protein degradation.peptidase families.cysteine-type... 0.04 OrthoFinder output from all 47 species
GSVIVT01009440001 No alias Oryzain alpha chain OS=Oryza sativa subsp. japonica 0.02 OrthoFinder output from all 47 species
GSVIVT01020657001 No alias Probable cysteine protease RD21B OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_31935 RD21, RD21A Prgrammed Cell Death cysteine protease (XCP) 0.02 OrthoFinder output from all 47 species
MA_103463g0010 No alias Vignain OS=Vigna mungo (sp|p12412|cysep_vigmu : 408.0) &... 0.02 OrthoFinder output from all 47 species
Msp_g46761 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Nbi_g09433 RD21, RD21A EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Pir_g05253 XCP1 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.02 OrthoFinder output from all 47 species
Pir_g10129 XBCP3 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.02 OrthoFinder output from all 47 species
Sam_g26370 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Solyc12g088670.2.1 RD21, RD21A,... Low-temperature-induced cysteine proteinase (Fragment)... 0.03 OrthoFinder output from all 47 species
Spa_g14706 RD21, RD21A EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Zm00001e010091_P001 SAG12, Zm00001e010091 Senescence-specific cysteine protease SAG12... 0.02 OrthoFinder output from all 47 species
Zm00001e035459_P002 Zm00001e035459 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEA Interproscan
MF GO:0008234 cysteine-type peptidase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0007165 signal transduction IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0035673 oligopeptide transmembrane transporter activity IEP HCCA
MF GO:0042887 amide transmembrane transporter activity IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1904680 peptide transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR013201 Prot_inhib_I29 48 107
IPR000668 Peptidase_C1A_C 143 359
No external refs found!