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  5. Ppi_g12836

Ppi_g12836


Description : actin stability co-factor *(PMIR) & original description: none


Gene families : OG0001272 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001272_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g12836
Cluster HCCA: Cluster_148

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00044p00107090 PMI1,... Cytoskeleton.cp-actin-dependent plastid... 0.02 OrthoFinder output from all 47 species
Adi_g058455 No alias actin stability co-factor *(PMIR) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g02621 No alias actin stability co-factor *(PMIR) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene05209.t1 Aspi01Gene05209 actin stability co-factor *(PMIR) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g37984 No alias actin stability co-factor *(PMIR) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01013417001 PMI1 Cytoskeleton.cp-actin-dependent plastid... 0.02 OrthoFinder output from all 47 species
Len_g13950 No alias actin stability co-factor *(PMIR) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g26104 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g17701 PMI1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_6196222g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g43326 No alias actin stability co-factor *(PMIR) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g10024 No alias actin stability co-factor *(PMIR) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g22563 No alias actin stability co-factor *(PMIR) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g37676 PMI1 actin stability factor *(PMI1) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12254 No alias actin stability co-factor *(PMIR) & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g12547 No alias actin stability co-factor *(PMIR) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e002231_P001 PMI1, Zm00001e002231 actin stability factor (PMI1/PMI15) 0.02 OrthoFinder output from all 47 species
Zm00001e019980_P001 Zm00001e019980 actin stability co-factor (PMIR) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR019448 NT-C2 121 262
IPR018392 LysM_dom 924 967
No external refs found!