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  5. Ppi_g12723

Ppi_g12723


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g12723

Target Alias Description ECC score Gene Family Method Actions
AT5G59200 OTP80 Tetratricopeptide repeat (TPR)-like superfamily protein 0.07 OrthoFinder output from all 47 species
Aev_g07974 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g25067 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g37465 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g12661 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g30723 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g33113 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g03800 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g19224 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g20670 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.02G071400.1 Ceric.02G071400 not classified & original description: pacid=50584970... 0.05 OrthoFinder output from all 47 species
Dac_g28151 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g45650 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g13146 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os01g10090.1 LOC_Os01g10090 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
LOC_Os02g01610.1 LOC_Os02g01610 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
LOC_Os04g43430.2 LOC_Os04g43430 RNA editing factor (MEF12) 0.03 OrthoFinder output from all 47 species
LOC_Os06g47920.1 LOC_Os06g47920 Pentatricopeptide repeat-containing protein At5g44230... 0.02 OrthoFinder output from all 47 species
LOC_Os08g13990.1 LOC_Os08g13990 Pentatricopeptide repeat-containing protein At2g37320... 0.04 OrthoFinder output from all 47 species
Len_g04269 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g54668 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_121102g0010 CRR22 Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
MA_961981g0010 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.03 OrthoFinder output from all 47 species
Msp_g23085 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g38614 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g25933 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g25355 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g28389 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g30777 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g27236 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g35259 RARE1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g065410.3.1 CRR22, Solyc02g065410 Pentatricopeptide repeat-containing protein At1g20230... 0.05 OrthoFinder output from all 47 species
Solyc03g063690.1.1 MEF1, Solyc03g063690 RNA editing factor (MEF1) 0.03 OrthoFinder output from all 47 species
Solyc11g040060.3.1 EMB2758, Solyc11g040060 Pentatricopeptide repeat-containing protein At4g33990... 0.04 OrthoFinder output from all 47 species
Spa_g14568 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g17792 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g24933 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e000621_P001 CRR22, Zm00001e000621 Pentatricopeptide repeat-containing protein At3g12770... 0.02 OrthoFinder output from all 47 species
Zm00001e008200_P001 Zm00001e008200 Pentatricopeptide repeat-containing protein At4g13650... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 381 411
IPR002885 Pentatricopeptide_repeat 150 172
IPR002885 Pentatricopeptide_repeat 179 209
IPR002885 Pentatricopeptide_repeat 482 511
IPR002885 Pentatricopeptide_repeat 353 379
IPR002885 Pentatricopeptide_repeat 74 121
IPR002885 Pentatricopeptide_repeat 277 324
No external refs found!