Description : component *(eL30) of large ribosomal-subunit (LSU) proteome & original description: none
Gene families : OG0000968 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000968_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Ppi_g12058 | |
Cluster | HCCA: Cluster_93 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT3G18740 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.03 | OrthoFinder output from all 47 species | |
Adi_g107576 | No alias | component *(eL30) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Aop_g17201 | No alias | component *(eL30) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Aop_g23120 | No alias | component *(eL30) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
Aop_g69765 | No alias | component *(eL30) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
Ceric.31G042300.1 | Ceric.31G042300 | component *(eL30) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Cre10.g420750 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g06686 | No alias | component *(eL30) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
Gb_02409 | No alias | component RPL30 of LSU proteome component | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os01g16890.1 | LOC_Os01g16890 | component RPL30 of LSU proteome component | 0.03 | OrthoFinder output from all 47 species | |
Len_g41479 | No alias | component *(eL30) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
Lfl_g14124 | No alias | component *(eL30) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
MA_6354g0010 | No alias | component RPL30 of LSU proteome component | 0.03 | OrthoFinder output from all 47 species | |
Mp7g01690.1 | No alias | component RPL30 of LSU proteome component | 0.03 | OrthoFinder output from all 47 species | |
Pir_g30538 | No alias | component *(eL30) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Pp3c12_9290V3.1 | Pp3c12_9290 | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.02 | OrthoFinder output from all 47 species | |
Pp3c16_10400V3.1 | Pp3c16_10400 | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.04 | OrthoFinder output from all 47 species | |
Pp3c25_9320V3.1 | Pp3c25_9320 | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.04 | OrthoFinder output from all 47 species | |
Pp3c4_15480V3.1 | Pp3c4_15480 | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.07 | OrthoFinder output from all 47 species | |
Sam_g00684 | No alias | component *(eL30) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
Sam_g41445 | No alias | component *(eL30) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Sam_g41910 | No alias | component *(eL30) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Smo19071 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.03 | OrthoFinder output from all 47 species | |
Solyc01g009100.4.1 | Solyc01g009100 | component RPL30 of LSU proteome component | 0.05 | OrthoFinder output from all 47 species | |
Solyc11g071490.2.1 | Solyc11g071490 | component RPL30 of LSU proteome component | 0.03 | OrthoFinder output from all 47 species | |
Spa_g00831 | No alias | component *(eL30) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
Tin_g05827 | No alias | component *(eL30) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e025492_P001 | Zm00001e025492 | component RPL30 of LSU proteome component | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e031987_P001 | Zm00001e031987 | component RPL30 of LSU proteome component | 0.05 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | HCCA |
MF | GO:0003674 | molecular_function | IEP | HCCA |
MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
MF | GO:0003924 | GTPase activity | IEP | HCCA |
MF | GO:0005198 | structural molecule activity | IEP | HCCA |
MF | GO:0005488 | binding | IEP | HCCA |
MF | GO:0005525 | GTP binding | IEP | HCCA |
CC | GO:0005575 | cellular_component | IEP | HCCA |
CC | GO:0005840 | ribosome | IEP | HCCA |
BP | GO:0006412 | translation | IEP | HCCA |
BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0008150 | biological_process | IEP | HCCA |
BP | GO:0008152 | metabolic process | IEP | HCCA |
MF | GO:0009055 | electron transfer activity | IEP | HCCA |
BP | GO:0009058 | biosynthetic process | IEP | HCCA |
BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0009987 | cellular process | IEP | HCCA |
MF | GO:0016462 | pyrophosphatase activity | IEP | HCCA |
MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | HCCA |
MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | HCCA |
MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
MF | GO:0017111 | ribonucleoside triphosphate phosphatase activity | IEP | HCCA |
MF | GO:0019001 | guanyl nucleotide binding | IEP | HCCA |
BP | GO:0019538 | protein metabolic process | IEP | HCCA |
MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
MF | GO:0032561 | guanyl ribonucleotide binding | IEP | HCCA |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
MF | GO:0036094 | small molecule binding | IEP | HCCA |
BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
MF | GO:0043168 | anion binding | IEP | HCCA |
BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
CC | GO:0043226 | organelle | IEP | HCCA |
CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
CC | GO:0043229 | intracellular organelle | IEP | HCCA |
CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
BP | GO:0043603 | amide metabolic process | IEP | HCCA |
BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
BP | GO:0044238 | primary metabolic process | IEP | HCCA |
BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR004038 | Ribosomal_L7Ae/L30e/S12e/Gad45 | 9 | 101 |
No external refs found! |