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  5. Ppi_g12002

Ppi_g12002 (PDE181, ZDS, SPC1)


Aliases : PDE181, ZDS, SPC1

Description : zeta-carotene desaturase *(ZDS) & original description: none


Gene families : OG0004455 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004455_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g12002

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00068p00029180 PDE181, ZDS,... Secondary metabolism.terpenoids.terpenoid... 0.04 OrthoFinder output from all 47 species
Adi_g057493 PDE181, ZDS, SPC1 zeta-carotene desaturase *(ZDS) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g08309 PDE181, ZDS, SPC1 zeta-carotene desaturase *(ZDS) & original description: none 0.06 OrthoFinder output from all 47 species
Als_g18412 PDE181, ZDS, SPC1 zeta-carotene desaturase *(ZDS) & original description: none 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000219.43 PDE181, ZDS, SPC1 Secondary metabolism.terpenoids.terpenoid... 0.02 OrthoFinder output from all 47 species
Cre07.g314150 PDE181, ZDS, SPC1 Secondary metabolism.terpenoids.terpenoid... 0.01 OrthoFinder output from all 47 species
Dde_g13728 PDE181, ZDS, SPC1 zeta-carotene desaturase *(ZDS) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05500 PDE181, ZDS, SPC1 zeta-carotene desaturase *(ZDS) & original description: none 0.05 OrthoFinder output from all 47 species
Mp5g14090.1 PDE181, ZDS, SPC1 zeta-carotene desaturase (ZDS) 0.03 OrthoFinder output from all 47 species
Msp_g40400 PDE181, ZDS, SPC1 zeta-carotene desaturase *(ZDS) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g07998 PDE181, ZDS, SPC1 zeta-carotene desaturase *(ZDS) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0032.g010946 PDE181, ZDS, SPC1 zeta-carotene desaturase *(ZDS) & original description:... 0.02 OrthoFinder output from all 47 species
Sam_g25901 No alias zeta-carotene desaturase *(ZDS) & original description: none 0.05 OrthoFinder output from all 47 species
Smo146971 PDE181, ZDS, SPC1 Secondary metabolism.terpenoids.terpenoid... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR002937 Amino_oxidase 109 573
No external refs found!