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  5. Ppi_g11891

Ppi_g11891


Description : substrate adaptor *(NRL) of CUL3-based E3 ubiquitin ligase complex & original description: none


Gene families : OG0000772 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000772_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g11891

Target Alias Description ECC score Gene Family Method Actions
Dcu_g03125 No alias substrate adaptor *(NRL) of CUL3-based E3 ubiquitin... 0.03 OrthoFinder output from all 47 species
Len_g16969 No alias substrate adaptor *(NRL) of CUL3-based E3 ubiquitin... 0.03 OrthoFinder output from all 47 species
Mp7g03290.1 No alias BTB/POZ domain-containing protein At1g30440... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
InterPro domains Description Start Stop
IPR027356 NPH3_dom 255 520
IPR000210 BTB/POZ_dom 46 155
No external refs found!