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  5. Ppi_g11856

Ppi_g11856


Description : not classified & original description: none


Gene families : OG0001474 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001474_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g11856
Cluster HCCA: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
Als_g21480 No alias LIM-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Als_g22072 No alias LIM-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g43336 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g20012 WLIM1 LIM-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g10224 No alias LIM-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g25168 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g17502 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g23314 No alias LIM-type transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
Lfl_g33750 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g34663 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g52627 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ppi_g62980 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0030674 protein-macromolecule adaptor activity IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
MF GO:0051015 actin filament binding IEP HCCA
MF GO:0060090 molecular adaptor activity IEP HCCA
InterPro domains Description Start Stop
IPR001781 Znf_LIM 6 58
No external refs found!