Aliases : ARF6
Description : transcriptional repressor *(IAA/AUX) & original description: none
Gene families : OG0000088 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000088_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00029p00157690 | ARF6,... | RNA biosynthesis.transcriptional activation.B3... | 0.03 | OrthoFinder output from all 47 species | |
AMTR_s00034p00110140 | ARF4 | RNA biosynthesis.transcriptional activation.B3... | 0.03 | OrthoFinder output from all 47 species | |
Adi_g055832 | ARF6 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Adi_g061151 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Adi_g098002 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ala_g15630 | ARF16 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g33091 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Als_g51944 | ARF19, IAA22, ARF11 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aop_g12700 | ARF6 | ARF-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Aspi01Gene05880.t1 | ARF19, IAA22,... | ARF-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Azfi_s0099.g044147 | ARF16 | ARF-type transcription factor & original description: CDS=1-2757 | 0.04 | OrthoFinder output from all 47 species | |
Cba_g04069 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Cba_g37448 | ARF6 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ceric.29G070000.1 | ARF6, Ceric.29G070000 | ARF-type transcription factor & original description:... | 0.05 | OrthoFinder output from all 47 species | |
Dac_g16977 | ARF6 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01027166001 | ARF11 | RNA biosynthesis.transcriptional activation.B3... | 0.03 | OrthoFinder output from all 47 species | |
MA_122218g0010 | ARF19, IAA22, ARF11 | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species | |
Pir_g08351 | ARF16 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Pir_g27620 | ARF4 | ARF-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Solyc01g103050.3.1 | ARF1, Solyc01g103050 | transcription factor (ARF) | 0.06 | OrthoFinder output from all 47 species | |
Solyc05g056040.3.1 | ARF11, Solyc05g056040 | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species | |
Solyc07g016180.3.1 | ARF19, IAA22,... | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species | |
Solyc09g007810.4.1 | ARF16, Solyc09g007810 | transcription factor (ARF) | 0.04 | OrthoFinder output from all 47 species | |
Spa_g55179 | ARF6 | ARF-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e006577_P003 | ARF8, ATARF8,... | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e018126_P002 | ARF6, Zm00001e018126 | transcription factor (ARF) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e018761_P001 | HSS, ARF1-BP,... | transcription factor (ARF) | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e020205_P004 | ARF3, ETT, Zm00001e020205 | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e041910_P003 | ARF8, ATARF8,... | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | Interproscan |
CC | GO:0005634 | nucleus | IEA | Interproscan |
BP | GO:0006355 | regulation of DNA-templated transcription | IEA | Interproscan |
BP | GO:0009725 | response to hormone | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003824 | catalytic activity | IEP | HCCA |
MF | GO:0003887 | DNA-directed DNA polymerase activity | IEP | HCCA |
MF | GO:0016740 | transferase activity | IEP | HCCA |
MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | HCCA |
MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | HCCA |
MF | GO:0034061 | DNA polymerase activity | IEP | HCCA |
MF | GO:0046983 | protein dimerization activity | IEP | HCCA |
MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
No external refs found! |