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  5. Aev_g09081

Aev_g09081


Description : not classified & original description: none


Gene families : OG0002848 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002848_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aev_g09081

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00230890 evm_27.TU.AmTr_v1... PHD finger protein EHD3 OS=Oryza sativa subsp. japonica 0.03 OrthoFinder output from all 47 species
Als_g56571 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g05322 ATMBD9, MBD9 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0063.g035330 No alias not classified & original description: CDS=129-3173 0.04 OrthoFinder output from all 47 species
Cba_g72066 ATMBD9, MBD9 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.22G072700.1 Ceric.22G072700 not classified & original description: pacid=50613963... 0.03 OrthoFinder output from all 47 species
Dac_g14533 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g11325 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g09739 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g02247 ATMBD9, MBD9 not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10431108g0010 No alias PHD finger protein EHD3 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Msp_g19802 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g19001 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g42294 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e029133_P002 Zm00001e029133 PHD finger protein EHD3 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
InterPro domains Description Start Stop
IPR001739 Methyl_CpG_DNA-bd 184 229
IPR019787 Znf_PHD-finger 791 838
IPR019787 Znf_PHD-finger 687 731
IPR019787 Znf_PHD-finger 587 632
No external refs found!