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  5. Ppi_g10798

Ppi_g10798


Description : small GTPase *(Sar1) & original description: none


Gene families : OG0001158 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001158_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g10798

Target Alias Description ECC score Gene Family Method Actions
AT1G56330 SAR1, ATSAR1B,... secretion-associated RAS 1B 0.03 OrthoFinder output from all 47 species
Adi_g042572 SAR1, ATSAR1B,... small GTPase *(Sar1) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g10715 SAR2, ATSARA1C,... small GTPase *(Sar1) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g31223 SAR1, ATSAR1B,... small GTPase *(Sar1) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.32G011200.1 SAR2, ATSARA1C,... small GTPase *(Sar1) & original description:... 0.03 OrthoFinder output from all 47 species
Cre11.g468300 SAR2, ATSARA1C,... Vesicle trafficking.Coat protein II (COPII) coatomer... 0.02 OrthoFinder output from all 47 species
Gb_10667 SAR2, ATSARA1C,... GTPase (Sar1) 0.02 OrthoFinder output from all 47 species
MA_10429869g0010 SAR2, ATSARA1C,... GTPase (Sar1) 0.02 OrthoFinder output from all 47 species
Pir_g05207 SAR2, ATSARA1C,... small GTPase *(Sar1) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g09989 SAR2, ATSARA1C,... small GTPase *(Sar1) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0091.g018792 SAR1, ATSAR1B,... small GTPase *(Sar1) & original description: CDS=186-767 0.04 OrthoFinder output from all 47 species
Solyc06g009660.3.1 SAR2, ATSARA1C,... GTPase (Sar1) 0.03 OrthoFinder output from all 47 species
Spa_g40971 SAR2, ATSARA1C,... small GTPase *(Sar1) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g00586 No alias small GTPase *(Sar1) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005048 signal sequence binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0006621 protein retention in ER lumen IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
BP GO:0032507 maintenance of protein location in cell IEP HCCA
MF GO:0033218 amide binding IEP HCCA
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP HCCA
MF GO:0042277 peptide binding IEP HCCA
BP GO:0045185 maintenance of protein location IEP HCCA
MF GO:0046923 ER retention sequence binding IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051235 maintenance of location IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0051651 maintenance of location in cell IEP HCCA
BP GO:0072595 maintenance of protein localization in organelle IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR006689 Small_GTPase_ARF/SAR 59 243
No external refs found!