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Description : not classified & original description: none
Gene families : OG0000026 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0000026_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Aev_g09033 | |
| Cluster | HCCA: Cluster_83 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00096p00110370 | ATARFA1B, ARFA1B | Vesicle trafficking.Coat protein I (COPI) coatomer... | 0.01 | OrthoFinder output from all 39 species | |
| Adi_g009715 | ATARFA1F, ARFA1F | not classified & original description: none | 0.01 | OrthoFinder output from all 39 species | |
| Adi_g098748 | ATARFA1B, ARFA1B | ARF-GTPase *(ARF1) & original description: none | 0.01 | OrthoFinder output from all 39 species | |
| Ala_g11192 | ATARFA1B, ARFA1B | ARF-GTPase *(ARF1) & original description: none | 0.01 | OrthoFinder output from all 39 species | |
| Ala_g30565 | ATARFA1F, ARFA1F | ARF-GTPase *(ARF1) & original description: none | 0.01 | OrthoFinder output from all 39 species | |
| Ala_g31131 | ATARFA1F, ARFA1F | ARF-GTPase *(ARF1) & original description: none | 0.02 | OrthoFinder output from all 39 species | |
| Aob_g06300 | ATARFA1F, ARFA1F | ARF-GTPase *(ARF1) & original description: none | 0.01 | OrthoFinder output from all 39 species | |
| Aob_g34615 | ATARFA1F, ARFA1F | not classified & original description: none | 0.01 | OrthoFinder output from all 39 species | |
| Aop_g07482 | ATARFA1B, ARFA1B | ARF-GTPase *(ARF1) & original description: none | 0.01 | OrthoFinder output from all 39 species | |
| Aspi01Gene62842.t1 | ATARFA1F,... | not classified & original description: none | 0.01 | OrthoFinder output from all 39 species | |
| Cba_g06881 | ATARFA1B, ARFA1B | ARF-GTPase *(ARF1) & original description: none | 0.01 | OrthoFinder output from all 39 species | |
| Cba_g49446 | ATARFA1F, ARFA1F | ARF-GTPase *(ARF1) & original description: none | 0.01 | OrthoFinder output from all 39 species | |
| Cba_g59814 | ATARFA1F, ARFA1F | ARF-GTPase *(ARF1) & original description: none | 0.01 | OrthoFinder output from all 39 species | |
| Ceric.12G056400.1 | ATARFA1B,... | ARF-GTPase *(ARF1) & original description:... | 0.01 | OrthoFinder output from all 39 species | |
| Dcu_g26494 | ARFA1E, ATARFA1E | ARF-GTPase *(ARF1) & original description: none | 0.02 | OrthoFinder output from all 39 species | |
| GSVIVT01013765001 | ARFA1E, ATARFA1E | Vesicle trafficking.Coat protein I (COPI) coatomer... | 0.01 | OrthoFinder output from all 39 species | |
| GSVIVT01031289001 | No alias | Solute transport.carrier-mediated transport.DMT... | 0.02 | OrthoFinder output from all 39 species | |
| LOC_Os01g59790.2 | ATARFA1F,... | ARF-GTPase | 0.01 | OrthoFinder output from all 39 species | |
| LOC_Os05g41060.1 | ATARFA1F,... | ARF-GTPase | 0.01 | OrthoFinder output from all 39 species | |
| Len_g35232 | ATARFA1F, ARFA1F | ARF-GTPase *(ARF1) & original description: none | 0.01 | OrthoFinder output from all 39 species | |
| Len_g36812 | ATARFA1F, ARFA1F | not classified & original description: none | 0.01 | OrthoFinder output from all 39 species | |
| Len_g36814 | ATARFA1F, ARFA1F | not classified & original description: none | 0.01 | OrthoFinder output from all 39 species | |
| Lfl_g22222 | ATARF1, ARF1,... | ARF-GTPase *(ARF1) & original description: none | 0.01 | OrthoFinder output from all 39 species | |
| MA_4349g0020 | ATARFA1F, ARFA1F | ARF-GTPase | 0.01 | OrthoFinder output from all 39 species | |
| Nbi_g15523 | ATARFA1F, ARFA1F | ARF-GTPase *(ARF1) & original description: none | 0.01 | OrthoFinder output from all 39 species | |
| Pir_g02141 | ATARFA1F, ARFA1F | ARF-GTPase *(ARF1) & original description: none | 0.01 | OrthoFinder output from all 39 species | |
| Pir_g06901 | ATARFA1F, ARFA1F | ARF-GTPase *(ARF1) & original description: none | 0.01 | OrthoFinder output from all 39 species | |
| Ppi_g10196 | ATARFA1F, ARFA1F | ARF-GTPase *(ARF1) & original description: none | 0.01 | OrthoFinder output from all 39 species | |
| Solyc01g008000.3.1 | ATARFA1B,... | ARF-GTPase | 0.02 | OrthoFinder output from all 39 species | |
| Spa_g05142 | ATARFA1B, ARFA1B | ARF-GTPase *(ARF1) & original description: none | 0.02 | OrthoFinder output from all 39 species | |
| Spa_g21145 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 39 species | |
| Spa_g49717 | ATARFA1B, ARFA1B | ARF-GTPase *(ARF1) & original description: none | 0.02 | OrthoFinder output from all 39 species | |
| Spa_g51715 | ATARFA1B, ARFA1B | ARF-GTPase *(ARF1) & original description: none | 0.02 | OrthoFinder output from all 39 species | |
| Tin_g02993 | ATARFA1F, ARFA1F | ARF-GTPase *(ARF1) & original description: none | 0.01 | OrthoFinder output from all 39 species | |
| Tin_g05371 | ATARFA1F, ARFA1F | ARF-GTPase *(ARF1) & original description: none | 0.01 | OrthoFinder output from all 39 species | |
| Tin_g05379 | ATARFA1F, ARFA1F | ARF-GTPase *(ARF1) & original description: none | 0.01 | OrthoFinder output from all 39 species | |
| Tin_g46062 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 39 species | |
| Zm00001e019488_P002 | ARFA1E,... | ARF-GTPase | 0.01 | OrthoFinder output from all 39 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
| MF | GO:0005198 | structural molecule activity | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005840 | ribosome | IEP | HCCA |
| BP | GO:0006364 | rRNA processing | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| BP | GO:0006412 | translation | IEP | HCCA |
| BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0016072 | rRNA metabolic process | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| CC | GO:0030684 | preribosome | IEP | HCCA |
| CC | GO:0030688 | preribosome, small subunit precursor | IEP | HCCA |
| BP | GO:0034470 | ncRNA processing | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
| BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
| BP | GO:0043603 | amide metabolic process | IEP | HCCA |
| BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |