1. Home
  2. Species
  3. Pyrrosia piloselloides
  4. Sequence
  5. Ppi_g10727

Ppi_g10727


Description : component *(SF3A2) of splicing factor 3A complex & original description: none


Gene families : OG0006197 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006197_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g10727
Cluster HCCA: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00176p00037260 evm_27.TU.AmTr_v1... RNA processing.RNA splicing.U2-type-intron-specific... 0.03 OrthoFinder output from all 47 species
AMTR_s00176p00038570 evm_27.TU.AmTr_v1... RNA processing.RNA splicing.U2-type-intron-specific... 0.03 OrthoFinder output from all 47 species
Aspi01Gene09557.t1 Aspi01Gene09557 component *(SF3A2) of splicing factor 3A complex &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene09558.t1 Aspi01Gene09558 component *(SF3A2) of splicing factor 3A complex &... 0.03 OrthoFinder output from all 47 species
Azfi_s0201.g057583 No alias component *(SF3A2) of splicing factor 3A complex &... 0.05 OrthoFinder output from all 47 species
Ceric.01G049300.1 Ceric.01G049300 component *(SF3A2) of splicing factor 3A complex &... 0.02 OrthoFinder output from all 47 species
Dac_g10480 No alias component *(SF3A2) of splicing factor 3A complex &... 0.04 OrthoFinder output from all 47 species
Dde_g12423 No alias component *(SF3A2) of splicing factor 3A complex &... 0.03 OrthoFinder output from all 47 species
GSVIVT01033687001 No alias RNA processing.RNA splicing.U2-type-intron-specific... 0.02 OrthoFinder output from all 47 species
Msp_g11611 No alias component *(SF3A2) of splicing factor 3A complex &... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0012.g005554 No alias component *(SF3A2) of splicing factor 3A complex &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0042393 histone binding IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
InterPro domains Description Start Stop
IPR031781 SF3A2_dom 110 204
No external refs found!