LOC_Os10g42390.1


Description : RING-H2-class E3 ligase


Gene families : OG_01_0000004 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_02_0000003 (LandPlants) Phylogenetic Tree(s): OG_02_0000003_tree ,
OG_03_0000056 (SeedPlants) Phylogenetic Tree(s): OG_03_0000056_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os10g42390.1
Cluster HCCA: Cluster_122

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00176670 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
AMTR_s00077p00070720 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
AMTR_s00077p00074350 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
AMTR_s00152p00054630 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.06 Archaeplastida
AT1G04360 No alias RING/U-box superfamily protein 0.06 Archaeplastida
AT1G53010 No alias RING/U-box superfamily protein 0.05 Archaeplastida
AT1G72200 No alias RING/U-box superfamily protein 0.04 Archaeplastida
AT1G72220 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT2G17730 NIP2 NEP-interacting protein 2 0.03 Archaeplastida
AT2G35910 No alias RING/U-box superfamily protein 0.04 Archaeplastida
AT2G37580 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT2G42350 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT3G10910 No alias RING/U-box superfamily protein 0.05 Archaeplastida
AT3G60966 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT3G61550 No alias RING/U-box superfamily protein 0.05 Archaeplastida
AT3G62690 ATL5 AtL5 0.03 Archaeplastida
AT4G09100 No alias RING/U-box superfamily protein 0.04 Archaeplastida
AT4G33565 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT5G41400 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT5G41440 No alias RING/U-box superfamily protein 0.02 Archaeplastida
GSVIVT01008754001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
GSVIVT01012022001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01026978001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01032684001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01036593001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
Gb_02533 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Gb_14785 No alias RING-H2 finger protein ATL78 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_14821 No alias RHA2 signal transducer of abscisic acid perception 0.02 Archaeplastida
Gb_15297 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Gb_20844 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_23066 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_35043 No alias NEP1-interacting protein 1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Gb_36232 No alias IDF1 iron uptake IRT1-ubiquitin ligase 0.02 Archaeplastida
Gb_41385 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os01g11500.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
LOC_Os01g20930.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os04g49000.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os04g49160.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os05g36310.1 No alias RING-H2 finger protein ATL77 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os06g07100.2 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
LOC_Os06g08820.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os06g34560.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os06g34880.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
LOC_Os06g50370.1 No alias NEP1-interacting protein 1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os11g02424.1 No alias RING-H2 finger protein ATL74 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os11g39640.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
MA_10021g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_10145129g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10429091g0010 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
MA_122471g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_125507g0010 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
MA_133839g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_15116g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_31736g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_391590g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_391931g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_462422g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_7120568g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_8710804g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_94359g0010 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Mp6g19130.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Pp3c14_14600V3.1 No alias RING/U-box superfamily protein 0.02 Archaeplastida
Pp3c14_22300V3.1 No alias No annotation 0.02 Archaeplastida
Pp3c22_15440V3.1 No alias RING/U-box superfamily protein 0.02 Archaeplastida
Pp3c23_10580V3.1 No alias RING/U-box superfamily protein 0.03 Archaeplastida
Pp3c23_1651V3.1 No alias RING/U-box superfamily protein 0.02 Archaeplastida
Pp3c4_30240V3.1 No alias TOXICOS EN LEVADURA 2 0.02 Archaeplastida
Pp3c5_4170V3.1 No alias RING/U-box superfamily protein 0.03 Archaeplastida
Solyc02g083660.1.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc03g005490.4.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Solyc03g114190.1.1 No alias RING-H2 finger protein ATL56 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Solyc03g123680.1.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc04g074820.3.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Solyc06g150136.1.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc09g066300.3.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Solyc11g005320.1.1 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
Solyc12g094690.1.1 No alias RING-H2 finger protein ATL8 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Zm00001e002233_P001 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e002430_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e007103_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e007157_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e011901_P001 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
Zm00001e013809_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e015449_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e015495_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e022175_P001 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Zm00001e022742_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e023515_P001 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
Zm00001e023585_P001 No alias RING-H2-class E3 ligase 0.07 Archaeplastida
Zm00001e032186_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e034025_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e036289_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e036691_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e038107_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e039314_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
AMTR_s00007p00056710 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 LandPlants
AMTR_s00030p00032810 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 LandPlants
AMTR_s00059p00176670 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.04 LandPlants
AMTR_s00077p00074350 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 LandPlants
AT1G04360 No alias RING/U-box superfamily protein 0.05 LandPlants
AT1G72220 No alias RING/U-box superfamily protein 0.02 LandPlants
AT2G17450 RHA3A RING-H2 finger A3A 0.02 LandPlants
AT2G37580 No alias RING/U-box superfamily protein 0.03 LandPlants
AT2G42350 No alias RING/U-box superfamily protein 0.02 LandPlants
AT3G10910 No alias RING/U-box superfamily protein 0.03 LandPlants
AT4G09100 No alias RING/U-box superfamily protein 0.02 LandPlants
AT4G33565 No alias RING/U-box superfamily protein 0.02 LandPlants
AT5G17600 No alias RING/U-box superfamily protein 0.02 LandPlants
AT5G41440 No alias RING/U-box superfamily protein 0.02 LandPlants
GSVIVT01032684001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 LandPlants
Gb_02533 No alias RING-H2-class E3 ligase 0.02 LandPlants
Gb_20844 No alias no hits & (original description: none) 0.02 LandPlants
LOC_Os01g11500.1 No alias RING-H2-class E3 ligase 0.03 LandPlants
LOC_Os01g20930.1 No alias no hits & (original description: none) 0.05 LandPlants
LOC_Os05g36310.1 No alias RING-H2 finger protein ATL77 OS=Arabidopsis thaliana... 0.03 LandPlants
LOC_Os06g34880.1 No alias RING-H2-class E3 ligase 0.04 LandPlants
LOC_Os11g02424.1 No alias RING-H2 finger protein ATL74 OS=Arabidopsis thaliana... 0.02 LandPlants
LOC_Os11g39640.1 No alias RING-H2-class E3 ligase 0.03 LandPlants
MA_10429091g0010 No alias RING-H2-class E3 ligase 0.02 LandPlants
MA_226198g0010 No alias no hits & (original description: none) 0.02 LandPlants
MA_391931g0010 No alias RING-H2-class E3 ligase 0.02 LandPlants
MA_8710804g0010 No alias no hits & (original description: none) 0.02 LandPlants
Solyc03g005490.4.1 No alias RING-H2-class E3 ligase 0.02 LandPlants
Solyc03g123680.1.1 No alias RING-H2-class E3 ligase 0.02 LandPlants
Solyc06g150136.1.1 No alias RING-H2-class E3 ligase 0.02 LandPlants
Solyc09g066300.3.1 No alias RING-H2-class E3 ligase 0.02 LandPlants
Solyc11g005320.1.1 No alias RING-H2-class E3 ligase 0.07 LandPlants
Solyc12g094690.1.1 No alias RING-H2 finger protein ATL8 OS=Arabidopsis thaliana... 0.05 LandPlants
Zm00001e002233_P001 No alias no hits & (original description: none) 0.04 LandPlants
Zm00001e002430_P001 No alias no hits & (original description: none) 0.03 LandPlants
Zm00001e007103_P001 No alias RING-H2-class E3 ligase 0.03 LandPlants
Zm00001e013412_P001 No alias no hits & (original description: none) 0.03 LandPlants
Zm00001e015495_P001 No alias RING-H2-class E3 ligase 0.03 LandPlants
Zm00001e017960_P001 No alias no hits & (original description: none) 0.03 LandPlants
Zm00001e023515_P001 No alias RING-H2-class E3 ligase 0.03 LandPlants
Zm00001e023585_P001 No alias RING-H2-class E3 ligase 0.06 LandPlants
Zm00001e038107_P001 No alias no hits & (original description: none) 0.03 LandPlants
Zm00001e039314_P001 No alias RING-H2-class E3 ligase 0.02 LandPlants
AT3G62690 ATL5 AtL5 0.03 SeedPlants
MA_101154g0010 No alias RING-H2-class E3 ligase 0.01 SeedPlants
MA_222729g0010 No alias RING-H2-class E3 ligase 0.01 SeedPlants
MA_407879g0010 No alias no hits & (original description: none) 0.02 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001841 Znf_RING 122 165
No external refs found!