- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : EMB2758
Description : not classified & original description: none
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Ppi_g10481 | |
| Cluster | HCCA: Cluster_24 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00010p00217860 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At4g13650... | 0.03 | OrthoFinder output from all 47 species | |
| AT5G13230 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g003717 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g003829 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g034754 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Adi_g036520 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g099290 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g099319 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g101200 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g18165 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g44555 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g24404 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g25466 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g20750 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g24517 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g27256 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g02534 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g03740 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g11928 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g16095 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g16217 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g16783 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g17428 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g19954 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g25532 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Aop_g25552 | OTP86 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g26804 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g30401 | DOT4 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g32922 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g36436 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g61512 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g67578 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g67869 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene01267.t2 | CRR2, Aspi01Gene01267 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g20235 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.09G032600.1 | Ceric.09G032600 | not classified & original description: pacid=50587514... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.26G001100.1 | Ceric.26G001100 | not classified & original description: pacid=50598974... | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g10056 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g11806 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g24515 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g25215 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g37683 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g08608 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g04238 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g15530.1 | LOC_Os01g15530 | Pentatricopeptide repeat-containing protein At5g56310... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g44210.2 | LOC_Os03g44210 | RNA editing factor (SEL1/PDM1) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os10g39460.2 | LOC_Os10g39460 | Putative pentatricopeptide repeat-containing protein... | 0.02 | OrthoFinder output from all 47 species | |
| Len_g18025 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g40474 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g04972 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g35930 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g04440 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g20156 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g23085 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g28351 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g28763 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g33650 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g45870 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g22164 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g01992 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g03367 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g19959 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g25355 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g25436 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g02568 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Pir_g09779 | OTP86 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g11273 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g13437 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g13457 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g13570 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g14457 | DOT4 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g16067 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Pir_g27565 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g33533 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Pir_g65306 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g03155 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g15285 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g30640 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g39647 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0004.g002433 | No alias | EC_2.7 transferase transferring phosphorus-containing... | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0177.g024659 | No alias | not classified & original description: CDS=1-642 | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g12240 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g16702 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g18554 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g23698 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g23937 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g27905 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g32763 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g54818 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g56096 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Tin_g04675 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Tin_g05859 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g06083 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g13479 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g20089 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 377 | 423 |
| IPR002885 | Pentatricopeptide_repeat | 74 | 120 |
| IPR002885 | Pentatricopeptide_repeat | 278 | 325 |
| IPR002885 | Pentatricopeptide_repeat | 176 | 222 |
| IPR002885 | Pentatricopeptide_repeat | 250 | 277 |
| IPR002885 | Pentatricopeptide_repeat | 151 | 173 |
| IPR046848 | E_motif | 496 | 540 |
| No external refs found! |