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  5. Ppi_g10254

Ppi_g10254 (TBL5)


Aliases : TBL5

Description : not classified & original description: none


Gene families : OG0000038 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g10254

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00023p00032550 TBL35,... Protein trichome birefringence-like 35 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT4G11090 TBL23 TRICHOME BIREFRINGENCE-LIKE 23 0.02 OrthoFinder output from all 47 species
AT5G49340 TBL4 TRICHOME BIREFRINGENCE-LIKE 4 0.01 OrthoFinder output from all 47 species
Adi_g008905 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g021574 TBL5 polysaccharide O-acetyltransferase *(TBR) & original... 0.02 OrthoFinder output from all 47 species
Cba_g05213 TBL10 rhamnogalacturonan-I O-acetyltransferase *(TBL) &... 0.03 OrthoFinder output from all 47 species
Dcu_g20867 TBL6 polysaccharide O-acetyltransferase *(TBR) & original... 0.02 OrthoFinder output from all 47 species
Dde_g29778 TBL16 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g23287 TBL25 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g08353 TBL11 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g10640 TBL25 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g06217 TBL23 mannan O-acetyltransferase *(MOAT) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0029.g010000 TBL24 not classified & original description: CDS=164-1597 0.03 OrthoFinder output from all 47 species
Solyc02g065610.3.1 TBL19, Solyc02g065610 Protein trichome birefringence-like 19 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e016007_P001 TBR, Zm00001e016007 Protein trichome birefringence OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016740 transferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
BP GO:0031179 peptide modification IEP HCCA
CC GO:0032039 integrator complex IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR026057 PC-Esterase 127 255
IPR025846 TBL_N 72 125
No external refs found!