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  5. Ppi_g10085

Ppi_g10085 (EMB2771)


Aliases : EMB2771

Description : component *(APC1) of (APC/C)-dependent ubiquitination platform subcomplex & original description: none


Gene families : OG0006432 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006432_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g10085

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00148280 EMB2771,... Cell cycle.mitosis and meiosis.metaphase to anaphase... 0.04 OrthoFinder output from all 47 species
AT5G05560 EMB2771 E3 ubiquitin ligase, putative 0.03 OrthoFinder output from all 47 species
Aev_g15018 EMB2771 component *(APC1) of (APC/C)-dependent ubiquitination... 0.03 OrthoFinder output from all 47 species
Als_g17485 EMB2771 component *(APC1) of (APC/C)-dependent ubiquitination... 0.04 OrthoFinder output from all 47 species
Azfi_s0130.g049023 EMB2771 component *(APC1) of (APC/C)-dependent ubiquitination... 0.03 OrthoFinder output from all 47 species
Ceric.30G071400.1 EMB2771, Ceric.30G071400 component *(APC1) of (APC/C)-dependent ubiquitination... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001623.3 EMB2771 Anaphase-promoting complex subunit 1 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Dac_g12112 EMB2771 component *(APC1) of (APC/C)-dependent ubiquitination... 0.02 OrthoFinder output from all 47 species
Lfl_g38762 EMB2771 component *(APC1) of (APC/C)-dependent ubiquitination... 0.04 OrthoFinder output from all 47 species
Mp4g04020.1 EMB2771 component APC1 of (APC/C)-dependent ubiquitination... 0.02 OrthoFinder output from all 47 species
Pir_g58795 EMB2771 component *(APC1) of (APC/C)-dependent ubiquitination... 0.05 OrthoFinder output from all 47 species
Sam_g50404 No alias component *(APC1) of (APC/C)-dependent ubiquitination... 0.02 OrthoFinder output from all 47 species
Smo126964 EMB2771 Cell cycle.mitosis and meiosis.metaphase to anaphase... 0.04 OrthoFinder output from all 47 species
Zm00001e031482_P002 EMB2771, Zm00001e031482 component APC1 of (APC/C)-dependent ubiquitination... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005680 anaphase-promoting complex IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP HCCA
MF GO:0004649 poly(ADP-ribose) glycohydrolase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP HCCA
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP HCCA
BP GO:0006282 regulation of DNA repair IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
MF GO:0008276 protein methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016278 lysine N-methyltransferase activity IEP HCCA
MF GO:0016279 protein-lysine N-methyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0018024 histone lysine N-methyltransferase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
MF GO:0042054 histone methyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0046903 secretion IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0051052 regulation of DNA metabolic process IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0080134 regulation of response to stress IEP HCCA
BP GO:0080135 regulation of cellular response to stress IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140352 export from cell IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:2001020 regulation of response to DNA damage stimulus IEP HCCA
InterPro domains Description Start Stop
IPR046794 Apc1_MidN 702 759
IPR041221 APC1_C 1575 1750
IPR024990 Apc1 101 242
No external refs found!