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Ppi_g10030 (HTA13)


Aliases : HTA13

Description : histone *(H2A) & original description: none


Gene families : OG0000117 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000117_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g10030

Target Alias Description ECC score Gene Family Method Actions
Als_g42846 HTA7 histone *(H2A) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene06356.t1 HTA6, Aspi01Gene06356 histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene56024.t1 GAMMA-H2AX,... histone *(H2A) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.26G005600.1 GAMMA-H2AX,... histone *(H2A) & original description: pacid=50599432... 0.03 OrthoFinder output from all 47 species
Ceric.26G005800.1 GAMMA-H2AX,... histone *(H2A) & original description: pacid=50599346... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001085.4 GAMMA-H2AX,... Chromatin organisation.histones.H2A-type histone 0.02 OrthoFinder output from all 47 species
Pir_g58974 GAMMA-H2AX,... histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g31452 No alias histone *(H2A) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e010515_P001 HTA2, Zm00001e010515 histone (H2A) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
InterPro domains Description Start Stop
IPR032454 Histone_H2A_C 92 123
IPR007125 Histone_H2A/H2B/H3 12 89
No external refs found!