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  5. Ppi_g09777

Ppi_g09777


Description : component *(IES2) of INO80 chromatin remodeling complex & original description: none


Gene families : OG0002110 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002110_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g09777
Cluster HCCA: Cluster_274

Target Alias Description ECC score Gene Family Method Actions
AT2G47350 No alias HIT zinc finger ;PAPA-1-like conserved region 0.04 OrthoFinder output from all 47 species
Adi_g056310 No alias component *(IES2) of INO80 chromatin remodeling complex... 0.02 OrthoFinder output from all 47 species
Als_g15896 No alias component *(IES2) of INO80 chromatin remodeling complex... 0.05 OrthoFinder output from all 47 species
Aob_g40727 No alias component *(IES2) of INO80 chromatin remodeling complex... 0.04 OrthoFinder output from all 47 species
GSVIVT01031244001 TPR5 RNA biosynthesis.DNA-dependent RNA polymerase (Pol)... 0.04 OrthoFinder output from all 47 species
Len_g28163 No alias component *(IES2) of INO80 chromatin remodeling complex... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0031011 Ino80 complex IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005337 nucleoside transmembrane transporter activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0015858 nucleoside transport IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:1901264 carbohydrate derivative transport IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP HCCA
BP GO:1901642 nucleoside transmembrane transport IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006880 INO80B_C 547 631
IPR007529 Znf_HIT 648 678
No external refs found!