Ppi_g09622 (ASK2, SKP1B)

Aliases : ASK2, SKP1B

Description : ASK-type linker component of SCF E3 ubiquitin ligase complexes & original description: none

Gene families : OG0000379 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000379_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ppi_g09622

Target	Alias	Description	ECC score	Gene Family Method
AT2G25700	ASK3, SK3	SKP1-like 3	0.02	OrthoFinder output from all 47 species
AT3G21830	SK8, ASK8	SKP1-like 8	0.03	OrthoFinder output from all 47 species
AT3G21840	ASK7, SK7	SKP1-like 7	0.03	OrthoFinder output from all 47 species
AT3G21860	ASK10, SK10	SKP1-like 10	0.02	OrthoFinder output from all 47 species
AT4G34470	SK12, ASK12	SKP1-like 12	0.07	OrthoFinder output from all 47 species
Azfi_s0003.g007582	No alias	not classified & original description: CDS=203-667	0.01	OrthoFinder output from all 47 species
Ceric.20G070900.1	ASK1, ATSKP1,...	ASK-type linker component of SCF E3 ubiquitin ligase...	0.08	OrthoFinder output from all 47 species
Ceric.20G071800.1	ASK1, ATSKP1,...	ASK-type linker component of SCF E3 ubiquitin ligase...	0.04	OrthoFinder output from all 47 species
Ceric.20G072200.1	ASK2, SKP1B,...	ASK-type linker component of SCF E3 ubiquitin ligase...	0.07	OrthoFinder output from all 47 species
Ceric.20G072300.1	ASK2, SKP1B,...	ASK-type linker component of SCF E3 ubiquitin ligase...	0.05	OrthoFinder output from all 47 species
Dac_g39230	ASK1, ATSKP1,...	ASK-type linker component of SCF E3 ubiquitin ligase...	0.03	OrthoFinder output from all 47 species
Dac_g41160	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
LOC_Os07g05150.1	ASK2, SKP1B,...	target protein binding component SKP1/ASK1 of...	0.06	OrthoFinder output from all 47 species
LOC_Os07g05160.1	ASK4, SK4, LOC_Os07g05160	target protein binding component SKP1/ASK1 of...	0.04	OrthoFinder output from all 47 species
LOC_Os07g05180.1	ASK2, SKP1B,...	target protein binding component SKP1/ASK1 of...	0.06	OrthoFinder output from all 47 species
LOC_Os07g43180.1	ASK2, SKP1B,...	target protein binding component SKP1/ASK1 of...	0.05	OrthoFinder output from all 47 species
LOC_Os07g43270.1	ASK1, ATSKP1,...	target protein binding component SKP1/ASK1 of...	0.07	OrthoFinder output from all 47 species
LOC_Os08g28800.1	ASK1, ATSKP1,...	target protein binding component SKP1/ASK1 of...	0.02	OrthoFinder output from all 47 species
LOC_Os08g28820.1	ASK1, ATSKP1,...	target protein binding component SKP1/ASK1 of...	0.07	OrthoFinder output from all 47 species
LOC_Os09g10270.1	ASK4, SK4, LOC_Os09g10270	target protein binding component SKP1/ASK1 of...	0.02	OrthoFinder output from all 47 species
Len_g26515	ASK1, ATSKP1,...	ASK-type linker component of SCF E3 ubiquitin ligase...	0.02	OrthoFinder output from all 47 species
MA_121410g0010	ASK1, ATSKP1,...	target protein binding component SKP1/ASK1 of...	0.02	OrthoFinder output from all 47 species
Nbi_g29347	ASK2, SKP1B	ASK-type linker component of SCF E3 ubiquitin ligase...	0.1	OrthoFinder output from all 47 species
Smo98727	ASK1, ATSKP1,...	Protein degradation.peptide tagging.Ubiquitin...	0.05	OrthoFinder output from all 47 species
Solyc10g055580.2.1	ASK2, SKP1B,...	target protein binding component SKP1/ASK1 of...	0.02	OrthoFinder output from all 47 species
Zm00001e011336_P001	ASK2, SKP1B,...	target protein binding component SKP1/ASK1 of...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0019941	modification-dependent protein catabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043632	modification-dependent macromolecule catabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044265	cellular macromolecule catabolic process	None	Extended
BP	GO:0051603	proteolysis involved in protein catabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	IEP	HCCA
MF	GO:0003677	DNA binding	IEP	HCCA
MF	GO:0003824	catalytic activity	IEP	HCCA
MF	GO:0004499	N,N-dimethylaniline monooxygenase activity	IEP	HCCA
MF	GO:0005215	transporter activity	IEP	HCCA
CC	GO:0005811	lipid droplet	IEP	HCCA
BP	GO:0006355	regulation of DNA-templated transcription	IEP	HCCA
BP	GO:0006486	protein glycosylation	IEP	HCCA
BP	GO:0009889	regulation of biosynthetic process	IEP	HCCA
BP	GO:0010468	regulation of gene expression	IEP	HCCA
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	HCCA
CC	GO:0012511	monolayer-surrounded lipid storage body	IEP	HCCA
MF	GO:0015299	obsolete solute:proton antiporter activity	IEP	HCCA
MF	GO:0015399	primary active transmembrane transporter activity	IEP	HCCA
CC	GO:0016020	membrane	IEP	HCCA
MF	GO:0016709	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	IEP	HCCA
MF	GO:0016757	glycosyltransferase activity	IEP	HCCA
MF	GO:0016758	hexosyltransferase activity	IEP	HCCA
MF	GO:0016787	hydrolase activity	IEP	HCCA
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEP	HCCA
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0019222	regulation of metabolic process	IEP	HCCA
MF	GO:0022857	transmembrane transporter activity	IEP	HCCA
MF	GO:0030599	pectinesterase activity	IEP	HCCA
BP	GO:0031323	regulation of cellular metabolic process	IEP	HCCA
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	HCCA
BP	GO:0042545	cell wall modification	IEP	HCCA
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEP	HCCA
BP	GO:0043413	macromolecule glycosylation	IEP	HCCA
BP	GO:0045229	external encapsulating structure organization	IEP	HCCA
MF	GO:0050660	flavin adenine dinucleotide binding	IEP	HCCA
MF	GO:0050661	NADP binding	IEP	HCCA
BP	GO:0050794	regulation of cellular process	IEP	HCCA
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	HCCA
BP	GO:0051252	regulation of RNA metabolic process	IEP	HCCA
MF	GO:0052689	carboxylic ester hydrolase activity	IEP	HCCA
BP	GO:0055085	transmembrane transport	IEP	HCCA
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	HCCA
BP	GO:0070085	glycosylation	IEP	HCCA
BP	GO:0071554	cell wall organization or biogenesis	IEP	HCCA
BP	GO:0071555	cell wall organization	IEP	HCCA
BP	GO:0080090	regulation of primary metabolic process	IEP	HCCA
MF	GO:0140359	ABC-type transporter activity	IEP	HCCA
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	HCCA
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR016073	Skp1_comp_POZ	6	63

External Links

No external refs found!

Ppi_g09622 (ASK2, SKP1B)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation