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  5. Ppi_g09512

Ppi_g09512


Description : component *(SKI3) of SUPERKILLER regulation complex & original description: none


Gene families : OG0004899 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004899_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g09512

Target Alias Description ECC score Gene Family Method Actions
Ala_g27528 No alias component *(SKI3) of SUPERKILLER regulation complex &... 0.03 OrthoFinder output from all 47 species
Ceric.1Z063400.1 Ceric.1Z063400 component *(SKI3) of SUPERKILLER regulation complex &... 0.04 OrthoFinder output from all 47 species
Ceric.33G017500.1 Ceric.33G017500 not classified & original description: pacid=50607406... 0.03 OrthoFinder output from all 47 species
Dac_g31744 No alias component *(SKI3) of SUPERKILLER regulation complex &... 0.03 OrthoFinder output from all 47 species
Dcu_g11179 No alias component *(SKI3) of SUPERKILLER regulation complex &... 0.03 OrthoFinder output from all 47 species
Lfl_g09869 No alias component *(SKI3) of SUPERKILLER regulation complex &... 0.03 OrthoFinder output from all 47 species
MA_81580g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_8519142g0010 No alias Tetratricopeptide repeat protein SKI3 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Mp1g26080.1 No alias component SKI3 of SUPERKILLER (SKI) regulation complex 0.04 OrthoFinder output from all 47 species
Sam_g08976 No alias component *(SKI3) of SUPERKILLER regulation complex &... 0.02 OrthoFinder output from all 47 species
Smo115934 No alias RNA processing.RNA decay.exosome complex.associated... 0.04 OrthoFinder output from all 47 species
Zm00001e002277_P001 Zm00001e002277 component SKI3 of SUPERKILLER (SKI) regulation complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
InterPro domains Description Start Stop
IPR019734 TPR_repeat 926 955
No external refs found!