LOC_Os10g40740.1


Description : transcription factor (bHLH)


Gene families : OG_01_0000092 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000092_tree ,
OG_02_0000040 (LandPlants) Phylogenetic Tree(s): OG_02_0000040_tree ,
OG_03_0011521 (SeedPlants) Phylogenetic Tree(s): OG_03_0011521_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os10g40740.1
Cluster HCCA: Cluster_247

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00141060 evm_27.TU.AmTr_v1... External stimuli response.light.red/far red light.PIF... 0.02 Archaeplastida
AT2G43010 SRL2, PIF4, AtPIF4 phytochrome interacting factor 4 0.03 Archaeplastida
AT3G21330 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Archaeplastida
AT3G59060 PIL6, PIF5 phytochrome interacting factor 3-like 6 0.04 Archaeplastida
AT4G00050 UNE10 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.07 Archaeplastida
AT5G43175 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Archaeplastida
GSVIVT01007914001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
Solyc01g090790.4.1 No alias transcription factor (bHLH) 0.05 Archaeplastida
Solyc06g069600.3.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
Zm00001e002331_P003 No alias transcription factor (bHLH) 0.06 Archaeplastida
Zm00001e021883_P001 No alias transcription factor (bHLH) 0.02 Archaeplastida
AMTR_s00045p00141060 evm_27.TU.AmTr_v1... External stimuli response.light.red/far red light.PIF... 0.02 LandPlants
AT3G59060 PIL6, PIF5 phytochrome interacting factor 3-like 6 0.03 LandPlants
AT4G00050 UNE10 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.05 LandPlants
AT5G43175 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 LandPlants
AT5G61270 PIF7 phytochrome-interacting factor7 0.01 LandPlants
GSVIVT01007914001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.02 LandPlants
Solyc01g090790.4.1 No alias transcription factor (bHLH) 0.05 LandPlants
Zm00001e002331_P003 No alias transcription factor (bHLH) 0.06 LandPlants
Zm00001e005046_P003 No alias transcription factor (bHLH). PIF red/far-red light... 0.02 LandPlants
AT4G00050 UNE10 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.05 SeedPlants
Solyc01g090790.4.1 No alias transcription factor (bHLH) 0.05 SeedPlants
Zm00001e002331_P003 No alias transcription factor (bHLH) 0.06 SeedPlants

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR011598 bHLH_dom 280 325
No external refs found!