Ppi_g08931


Description : not classified & original description: none


Gene families : OG0001104 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001104_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g08931

Target Alias Description ECC score Gene Family Method Actions
Aev_g07294 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g13606 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g05066 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g20063 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene11767.t1 Aspi01Gene11767 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene70936.t1 Aspi01Gene70936 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.03G036200.1 Ceric.03G036200 not classified & original description: pacid=50571952... 0.03 OrthoFinder output from all 47 species
Ceric.16G010400.1 Ceric.16G010400 not classified & original description: pacid=50589761... 0.03 OrthoFinder output from all 47 species
Ceric.19G017900.1 Ceric.19G017900 not classified & original description: pacid=50576444... 0.03 OrthoFinder output from all 47 species
Dcu_g09922 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g07946 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g01567 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g19050 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01019040001 No alias Pentatricopeptide repeat-containing protein At5g66631... 0.03 OrthoFinder output from all 47 species
Gb_32462 No alias Pentatricopeptide repeat-containing protein At4g31850,... 0.04 OrthoFinder output from all 47 species
Lfl_g05606 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005739 mitochondrion IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 254 303
IPR033443 PPR_long 509 661
IPR002885 Pentatricopeptide_repeat 175 231
No external refs found!