- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : CRR2
Description : not classified & original description: none
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00001p00272900 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00009p00268260 | evm_27.TU.AmTr_v1... | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| AT1G50270 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.06 | OrthoFinder output from all 47 species | |
| Adi_g005790 | OTP86 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g07176 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g28308 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g54758 | EMB2758 | ssDNA-binding protein *(OSB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g18705 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g11906 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene02401.t1 | EMB2758, Aspi01Gene02401 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene34087.t1 | OTP86, Aspi01Gene34087 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene35154.t1 | Aspi01Gene35154 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene37396.t1 | Aspi01Gene37396 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0001.g000903 | EMB2261 | not classified & original description: CDS=1-2043 | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0005.g009065 | No alias | not classified & original description: CDS=1-2421 | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0009.g011917 | No alias | not classified & original description: CDS=1-393 | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0059.g034591 | No alias | not classified & original description: CDS=1-1749 | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0219.g058621 | No alias | not classified & original description: CDS=1-3672 | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s0410.g068507 | No alias | not classified & original description: CDS=1-2022 | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s2932.g113765 | CRR22 | not classified & original description: CDS=1-1710 | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g02684 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g35120 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.01G018600.1 | Ceric.01G018600 | not classified & original description: pacid=50592052... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.26G013000.1 | Ceric.26G013000 | not classified & original description: pacid=50600010... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.26G072000.1 | Ceric.26G072000 | not classified & original description: pacid=50599752... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.29G078100.1 | Ceric.29G078100 | not classified & original description: pacid=50625063... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.33G060200.1 | Ceric.33G060200 | not classified & original description: pacid=50607485... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g18582 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g07693 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g16812 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g19445 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g04434 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g04453 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g08678 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g10497 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g17698 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g18169 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g19684 | EMB2758 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g21331 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g21829 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g26547 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g26933 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g28218 | EMB2758 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g31261 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g40646 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g41697 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g48000 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g51019 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g12101 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os08g06490.2 | SLO1, LOC_Os08g06490 | Pentatricopeptide repeat-containing protein At4g22760... | 0.04 | OrthoFinder output from all 47 species | |
| Len_g03881 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g04970 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g06716 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Lfl_g07044 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g13399 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| MA_465411g0010 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | OrthoFinder output from all 47 species | |
| MA_511569g0010 | No alias | Pentatricopeptide repeat-containing protein At2g27610... | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g01185 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g28352 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g45870 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g05322 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g08794 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g10800 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g11485 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g15699 | CRR22 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g06239 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g13591 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g57511 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Pir_g57955 | OTP86 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g63473 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Pir_g63502 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g63629 | LPA66 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Pir_g64875 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g59316 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0003.g001819 | OTP86 | not classified & original description: CDS=1-3381 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0009.g004577 | No alias | not classified & original description: CDS=1-1743 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0014.g006120 | No alias | ssDNA-binding protein *(OSB) & original description: CDS=52-378 | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0014.g006214 | No alias | not classified & original description: CDS=115-2940 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0051.g013907 | No alias | not classified & original description: CDS=1-1875 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0064.g015808 | No alias | EC_2.5 transferase transferring alkyl or aryl group,... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc05g023900.1.1 | Solyc05g023900 | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g06005 | EMB2758 | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Spa_g06411 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g06686 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g06871 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g07009 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g13906 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g18014 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g18079 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Spa_g20093 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g20180 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g20190 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g21449 | EMB2261 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g22619 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g23138 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g23605 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g23704 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g26573 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g26703 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g41043 | OTP84 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g43840 | OTP84 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g49909 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g05579 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g05931 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Tin_g10679 | OTP82 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g11066 | PTAC9, OSB2 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g17268 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Tin_g26892 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Tin_g26902 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Tin_g29864 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g31905 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g35670 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e007462_P001 | Zm00001e007462 | Putative pentatricopeptide repeat-containing protein... | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e029819_P003 | CRR22, Zm00001e029819 | RNA editing factor (CRR22) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 153 | 179 |
| IPR002885 | Pentatricopeptide_repeat | 358 | 383 |
| IPR002885 | Pentatricopeptide_repeat | 386 | 414 |
| IPR002885 | Pentatricopeptide_repeat | 459 | 478 |
| IPR002885 | Pentatricopeptide_repeat | 125 | 148 |
| IPR002885 | Pentatricopeptide_repeat | 283 | 331 |
| IPR002885 | Pentatricopeptide_repeat | 181 | 229 |
| No external refs found! |