Zm00001d026415 (GRMZM2G136895)

Aliases : GRMZM2G136895

Description : 10.6.2 cell wall.degradation.mannan-xylose-arabinose-fucose Encodes a beta-d-xylosidase that belongs to family 3 of glycoside hydrolases. beta-D-xylosidase 4 (XYL4)

Gene families : OG_01_0000215 (Gene family) Phylogenetic Tree(s): OG0000215_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d026415
Cluster HCCA cluster: Cluster_93

Target Alias Description ECC score Gene Family Method Actions
AT5G64570 XYL4, ATBXL4 beta-D-xylosidase 4 0.03 Gene family
GSVIVT01013328001 No alias 10.6.2 cell... 0.03 Gene family
LOC_Os01g19220 Os01g0296700 10.6.2 cell... 0.05 Gene family
LOC_Os02g51620 Os02g0752200 10.6.2 cell... 0.06 Gene family
LOC_Os04g54810 Os04g0640700 10.6.2 cell... 0.07 Gene family
LOC_Os11g19210 Os11g0297800 10.6.2 cell... 0.04 Gene family
MA_6160451g0010 No alias 10.6.2 cell... 0.02 Gene family
Solyc01g104950.3.1 Solyc01g104950.3 10.6.2 cell... 0.03 Gene family
Solyc04g072850.3.1 Solyc04g072850.3 10.6.2 cell... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA InterProScan
BP GO:0005975 carbohydrate metabolic process IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR026891 Fn3-like 578 644
IPR002772 Glyco_hydro_3_C 288 517
IPR001764 Glyco_hydro_3_N 33 243
No external refs found!