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  5. Ppi_g08808

Ppi_g08808


Description : bHLH-type transcription factor & original description: none


Gene families : OG0000245 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000245_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g08808
Cluster HCCA: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00225810 ATMYC2, MYC2,... RNA biosynthesis.transcriptional activation.bHLH... 0.04 OrthoFinder output from all 47 species
AMTR_s00021p00226670 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.02 OrthoFinder output from all 47 species
AMTR_s00099p00127980 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.02 OrthoFinder output from all 47 species
AMTR_s00121p00026620 ATMYC2, MYC2,... RNA biosynthesis.transcriptional activation.bHLH... 0.04 OrthoFinder output from all 47 species
AT1G32640 ATMYC2, MYC2,... Basic helix-loop-helix (bHLH) DNA-binding family protein 0.02 OrthoFinder output from all 47 species
Adi_g079557 AIB, ATAIB bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g02266 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g13949 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g37617 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g19244 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g19786 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene06699.t1 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene09116.t1 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0114.g046110 No alias bHLH-type transcription factor & original description: CDS=1-2184 0.01 OrthoFinder output from all 47 species
Dac_g07570 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g07876 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g14107 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g06378 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g07082 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01000771001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.02 OrthoFinder output from all 47 species
LOC_Os09g34330.1 ATMYC2, MYC2,... transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Len_g49188 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g02388 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g04153 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g32054 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g15105 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g09902 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g16903 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g19559 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g10858 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g20048 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g02577 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g13054 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g13609 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0019.g007871 ATMYC2, MYC2,... bHLH-type transcription factor & original description: CDS=1-2427 0.02 OrthoFinder output from all 47 species
Smo158887 No alias Transcription factor bHLH13 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Spa_g06271 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g12383 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g21627 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g22636 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g49636 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g56676 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g03440 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e026126_P001 Zm00001e026126 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004478 methionine adenosyltransferase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
CC GO:0005739 mitochondrion IEP HCCA
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032780 negative regulation of ATP-dependent activity IEP HCCA
MF GO:0042030 ATPase inhibitor activity IEP HCCA
BP GO:0043462 regulation of ATP-dependent activity IEP HCCA
BP GO:0044092 negative regulation of molecular function IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0046500 S-adenosylmethionine metabolic process IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 461 507
IPR025610 MYC/MYB_N 52 232
No external refs found!