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  5. Ppi_g08796

Ppi_g08796


Description : not classified & original description: none


Gene families : OG0011726 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0011726_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g08796

Target Alias Description ECC score Gene Family Method Actions
Adi_g015292 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g02657 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g13982 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Azfi_s0074.g037453 No alias not classified & original description: CDS=1-2481 0.05 OrthoFinder output from all 47 species
Ceric.36G054500.1 Ceric.36G054500 not classified & original description: pacid=50568462... 0.04 OrthoFinder output from all 47 species
Dde_g09936 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g13979 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g40082 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Pir_g15149 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0018.g007478 No alias not classified & original description: CDS=1-2787 0.05 OrthoFinder output from all 47 species
Spa_g08139 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g16988 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 761 807
IPR002885 Pentatricopeptide_repeat 861 909
IPR002885 Pentatricopeptide_repeat 484 531
IPR002885 Pentatricopeptide_repeat 383 429
IPR002885 Pentatricopeptide_repeat 936 960
IPR002885 Pentatricopeptide_repeat 662 691
IPR002885 Pentatricopeptide_repeat 154 179
IPR002885 Pentatricopeptide_repeat 284 312
IPR002885 Pentatricopeptide_repeat 357 382
IPR002885 Pentatricopeptide_repeat 458 482
IPR002885 Pentatricopeptide_repeat 81 108
No external refs found!