Ppi_g08578


Description : not classified & original description: none


Gene families : OG0009764 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0009764_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g08578
Cluster HCCA: Cluster_62

Target Alias Description ECC score Gene Family Method Actions
Als_g61396 LHCA2*1, LHCA6 non-photochemical quenching LhcSR protein & original... 0.04 OrthoFinder output from all 47 species
Aop_g15836 LHCA2*1, LHCA6 non-photochemical quenching LhcSR protein & original... 0.04 OrthoFinder output from all 47 species
Cre08.g365900 LHCA2 Photosynthesis.photophosphorylation.photosystem... 0.02 OrthoFinder output from all 47 species
Pnu_g31043 LHCA2 non-photochemical quenching LhcSR protein & original... 0.11 OrthoFinder output from all 47 species
Ppi_g10166 LHCA1 non-photochemical quenching LhcSR protein & original... 0.05 OrthoFinder output from all 47 species
Ppi_g15204 LHCA2*1, LHCA6 non-photochemical quenching LhcSR protein & original... 0.08 OrthoFinder output from all 47 species
Ppi_g27533 LHCA2 non-photochemical quenching LhcSR protein & original... 0.05 OrthoFinder output from all 47 species
Ppi_g63943 LHCA2*1, LHCA6 non-photochemical quenching LhcSR protein & original... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0009055 electron transfer activity IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009536 plastid IEP HCCA
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
InterPro domains Description Start Stop
IPR022796 Chloroa_b-bind 61 198
No external refs found!