1. Home
  2. Species
  3. Pyrrosia piloselloides
  4. Sequence
  5. Ppi_g08245

Ppi_g08245


Description : not classified & original description: none


Gene families : OG0007491 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007491_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g08245

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0099.g043991 OTP84 not classified & original description: CDS=230-3472 0.02 OrthoFinder output from all 47 species
Ceric.02G004500.1 Ceric.02G004500 not classified & original description: pacid=50584632... 0.02 OrthoFinder output from all 47 species
Ceric.15G002000.1 Ceric.15G002000 not classified & original description: pacid=50640344... 0.03 OrthoFinder output from all 47 species
Ceric.17G084700.1 Ceric.17G084700 not classified & original description: pacid=50618199... 0.03 OrthoFinder output from all 47 species
Dac_g10625 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g14757 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g13635 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g03497 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g21687 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g13553 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0025.g009384 No alias not classified & original description: CDS=123-3881 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0234.g026528 No alias not classified & original description: CDS=213-3461 0.02 OrthoFinder output from all 47 species
Sam_g08396 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g15754 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g21963 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004177 aminopeptidase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005253 monoatomic anion channel activity IEP HCCA
MF GO:0005254 chloride channel activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0008509 monoatomic anion transmembrane transporter activity IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
MF GO:0015108 chloride transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 570 611
IPR002885 Pentatricopeptide_repeat 263 289
IPR002885 Pentatricopeptide_repeat 899 924
IPR002885 Pentatricopeptide_repeat 465 489
IPR002885 Pentatricopeptide_repeat 737 756
IPR002885 Pentatricopeptide_repeat 670 696
IPR032867 DYW_dom 1067 1147
IPR002885 Pentatricopeptide_repeat 362 409
IPR002885 Pentatricopeptide_repeat 762 808
No external refs found!