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  5. Ppi_g07629

Ppi_g07629


Description : not classified & original description: none


Gene families : OG0002734 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002734_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g07629

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00173p00060580 evm_27.TU.AmTr_v1... Histone-lysine N-methyltransferase ATX1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT1G77800 No alias PHD finger family protein 0.04 OrthoFinder output from all 47 species
Ala_g06882 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.29G080500.1 Ceric.29G080500 not classified & original description: pacid=50624681... 0.04 OrthoFinder output from all 47 species
Ehy_g15953 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os02g52960.1 LOC_Os02g52960 Histone-lysine N-methyltransferase ATX1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os06g10690.1 LOC_Os06g10690 Histone-lysine N-methyltransferase ATX1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_10435451g0030 No alias Histone-lysine N-methyltransferase ATX1 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Msp_g14549 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0138.g022590 No alias not classified & original description: CDS=632-4768 0.04 OrthoFinder output from all 47 species
Sam_g14038 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e030795_P001 Zm00001e030795 Histone-lysine N-methyltransferase ATX1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0000469 cleavage involved in rRNA processing IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003917 DNA topoisomerase type I (single strand cut, ATP-independent) activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0090305 nucleic acid phosphodiester bond hydrolysis IEP HCCA
BP GO:0090501 RNA phosphodiester bond hydrolysis IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!