Zm00001d026111 (GRMZM2G702579)


Aliases : GRMZM2G702579

Description : 33.99 development.unspecified Encodes an RNA Slicer that selectively recruits microRNAs and siRNAs. There is currently no evidence that AGO1 Slicer is in a high molecular weight RNA-induced silencing complex (RISC). Mutants are defective in post-transcriptional gene silencing and have pleiotropic developmental and morphological defects. Through its action on the regulation of ARF17 expression, the protein regulates genes involved at the cross talk between auxin and light signaling during adventitious root development. AGO1 seems to be targeted for degradation by silencing suppressor F-box-containing proteins from Turnip yellow virus and Cucurbit aphid-borne yellow virus. ARGONAUTE 1 (AGO1)


Gene families : OG_01_0000084 (Gene family) Phylogenetic Tree(s): OG0000084_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d026111
Cluster HCCA cluster: Cluster_288

Target Alias Description ECC score Gene Family Method Actions
AT1G31290 AGO3 ARGONAUTE 3 0.03 Gene family
AT1G48410 AGO1 Stabilizer of iron transporter SufD / Polynucleotidyl transferase 0.03 Gene family
AT2G27040 AGO4, OCP11 Argonaute family protein 0.05 Gene family
AT2G32940 AGO6 Argonaute family protein 0.1 Gene family
AT5G21150 AGO9 Argonaute family protein 0.02 Gene family
AT5G43810 PNH, AGO10, ZLL Stabilizer of iron transporter SufD / Polynucleotidyl transferase 0.08 Gene family
GSVIVT01018054001 No alias 29.2.3 protein.synthesis.initiation Encodes a member of... 0.03 Gene family
GSVIVT01025868001 No alias 27.3.36 RNA.regulation of transcription.Argonaute AGO4... 0.04 Gene family
GSVIVT01030512001 No alias 33.99 development.unspecified Encodes a nuclear... 0.02 Gene family
GSVIVT01031430001 No alias 33.99 development.unspecified ARGONAUTE 5 (AGO5) 0.02 Gene family
GSVIVT01033726001 No alias 33.99 development.unspecified ARGONAUTE 5 (AGO5) 0.02 Gene family
GSVIVT01037488001 No alias 27.3.36 RNA.regulation of transcription.Argonaute AGO4... 0.02 Gene family
LOC_Os01g16870 Os01g0275600 27.3.36 RNA.regulation of transcription.Argonaute AGO4... 0.03 Gene family
LOC_Os02g07310 Os02g0169400 33.99 development.unspecified Encodes an RNA Slicer that... 0.02 Gene family
LOC_Os03g58600 Os03g0800200 33.99 development.unspecified ARGONAUTE 5 (AGO5) 0.05 Gene family
LOC_Os04g06770 Os04g0151800 27.3.36 RNA.regulation of transcription.Argonaute AGO4... 0.02 Gene family
LOC_Os04g47870 Os04g0566500 33.99 development.unspecified Encodes an RNA Slicer that... 0.03 Gene family
LOC_Os06g39640 Os06g0597400 29.2.3 protein.synthesis.initiation Encodes a member of... 0.02 Gene family
MA_14457g0010 No alias 33.99 development.unspecified AGO9-dependent sRNA... 0.02 Gene family
MA_594g0010 No alias 33.99 development.unspecified Encodes an RNA Slicer that... 0.04 Gene family
Solyc01g008960.3.1 Solyc01g008960.3 27.3.36 RNA.regulation of transcription.Argonaute AGO4... 0.02 Gene family
Solyc06g073540.3.1 Solyc06g073540.3 27.3.36 RNA.regulation of transcription.Argonaute AGO4... 0.06 Gene family
Solyc07g049500.3.1 Solyc07g049500.3 33.99 development.unspecified Encodes a nuclear... 0.04 Gene family
Solyc09g082830.3.1 Solyc09g082830.3 29.2.3 protein.synthesis.initiation Encodes a member of... 0.1 Gene family
Zm00001d007786 GRMZM2G059033 33.99 development.unspecified ARGONAUTE 5 (AGO5) 0.03 Gene family
Zm00001d019905 GRMZM2G347402,... 33.99 development.unspecified Encodes a nuclear... 0.02 Gene family
Zm00001d021345 GRMZM2G393455 33.99 development.unspecified Encodes an RNA Slicer that... 0.03 Gene family
Zm00001d033206 GRMZM2G457370 29.2.3 protein.synthesis.initiation Encodes a member of... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003100 PAZ_dom 311 436
IPR032473 Argonaute_Mid_dom 504 578
IPR003165 Piwi 598 917
IPR024357 Argonaut_Gly-rich 1 88
IPR014811 ArgoL1 255 304
IPR032474 Argonaute_N 107 245
IPR032472 ArgoL2 447 493
No external refs found!