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  5. Ppi_g06439

Ppi_g06439


Description : germ cell differentiation factor *(RKD) & original description: none


Gene families : OG0000385 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000385_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g06439

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00218190 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.NIN-like... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001304.5 No alias No description available 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001443.5 No alias No description available 0.01 OrthoFinder output from all 47 species
Dcu_g41814 No alias germ cell differentiation factor *(RKD) & original... 0.04 OrthoFinder output from all 47 species
GSVIVT01007998001 No alias RNA biosynthesis.transcriptional activation.NIN-like... 0.03 OrthoFinder output from all 47 species
LOC_Os12g12970.1 LOC_Os12g12970 transcription factor (RKD) 0.02 OrthoFinder output from all 47 species
Ore_g29160 No alias germ cell differentiation factor *(RKD) & original... 0.03 OrthoFinder output from all 47 species
Pp3c23_19070V3.1 Pp3c23_19070 No annotation 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
InterPro domains Description Start Stop
IPR003035 RWP-RK_dom 524 571
No external refs found!