Ppi_g05945

Description : subfamily ABCG transporter & original description: none

Gene families : OG0001702 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001702_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ppi_g05945

Target	Alias	Description	ECC score	Gene Family Method
AT2G37010	ATNAP12, NAP12	non-intrinsic ABC protein 12	0.02	OrthoFinder output from all 47 species
Aob_g13432	No alias	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0075.g037686	No alias	subfamily ABCG transporter & original description: CDS=355-3330	0.03	OrthoFinder output from all 47 species
LOC_Os06g51460.1	LOC_Os06g51460	subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species
LOC_Os10g30610.1	LOC_Os10g30610	subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0045.g013183	No alias	subfamily ABCG transporter & original description: CDS=554-3865	0.02	OrthoFinder output from all 47 species
Solyc04g025170.4.1	Solyc04g025170	subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species
Solyc06g075020.3.1	Solyc06g075020	subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species
Solyc09g008000.3.1	ATNAP12, NAP12,...	subfamily ABCG transporter	0.04	OrthoFinder output from all 47 species
Zm00001e004692_P001	Zm00001e004692	subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species
Zm00001e008651_P001	Zm00001e008651	subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003824	catalytic activity	IEP	HCCA
MF	GO:0004497	monooxygenase activity	IEP	HCCA
MF	GO:0005506	iron ion binding	IEP	HCCA
BP	GO:0006811	monoatomic ion transport	IEP	HCCA
BP	GO:0006812	monoatomic cation transport	IEP	HCCA
MF	GO:0008094	ATP-dependent activity, acting on DNA	IEP	HCCA
MF	GO:0008233	peptidase activity	IEP	HCCA
MF	GO:0008234	cysteine-type peptidase activity	IEP	HCCA
MF	GO:0015299	obsolete solute:proton antiporter activity	IEP	HCCA
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	HCCA
MF	GO:0016787	hydrolase activity	IEP	HCCA
MF	GO:0140096	catalytic activity, acting on a protein	IEP	HCCA
MF	GO:0140097	catalytic activity, acting on DNA	IEP	HCCA
MF	GO:0140640	catalytic activity, acting on a nucleic acid	IEP	HCCA
MF	GO:0140658	ATP-dependent chromatin remodeler activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR043926	ABCG_dom	765	1172
IPR003439	ABC_transporter-like_ATP-bd	585	736

External Links

No external refs found!