Ppi_g05912


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g05912

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00257350 evm_27.TU.AmTr_v1... RNA processing.organelle machineries.RNA... 0.02 OrthoFinder output from all 47 species
AMTR_s00022p00232590 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
AMTR_s00057p00172690 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g37170... 0.02 OrthoFinder output from all 47 species
AMTR_s00077p00191560 OTP82,... Pentatricopeptide repeat-containing protein DOT4,... 0.02 OrthoFinder output from all 47 species
AMTR_s00078p00067180 EMB2261,... Pentatricopeptide repeat-containing protein At2g46050,... 0.02 OrthoFinder output from all 47 species
AMTR_s00137p00065490 No alias Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
AT1G25360 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G53360 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G14050 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g003786 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g004489 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g004975 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g005761 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g005780 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g013193 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g015420 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g019140 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g025356 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g034320 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g034782 LPA66 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g036821 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g061031 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g066704 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g069188 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g074266 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g082767 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g088386 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g101337 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g107058 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g118106 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g18166 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g32627 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g05316 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g07993 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g09664 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g27912 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g03179 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g04484 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05105 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05133 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06398 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06415 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07465 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g08105 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g14743 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19114 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g21031 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g32399 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g54371 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g57160 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g58582 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g59835 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g60944 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g61738 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g09402 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g13404 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g28675 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g68127 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0002.g001613 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: CDS=195-1385 0.03 OrthoFinder output from all 47 species
Azfi_s0003.g007676 No alias not classified & original description: CDS=1-2364 0.03 OrthoFinder output from all 47 species
Azfi_s0010.g012363 No alias not classified & original description: CDS=1-2442 0.03 OrthoFinder output from all 47 species
Azfi_s0022.g016118 OTP84 not classified & original description: CDS=1-2007 0.03 OrthoFinder output from all 47 species
Azfi_s0117.g046569 No alias not classified & original description: CDS=1-2520 0.02 OrthoFinder output from all 47 species
Azfi_s0164.g054263 No alias not classified & original description: CDS=137-2560 0.03 OrthoFinder output from all 47 species
Azfi_s0173.g055844 CRR22 not classified & original description: CDS=1-1863 0.03 OrthoFinder output from all 47 species
Cba_g06861 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20102 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20881 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g68954 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G107500.1 Ceric.01G107500 not classified & original description: pacid=50592273... 0.04 OrthoFinder output from all 47 species
Ceric.04G109500.1 Ceric.04G109500 not classified & original description: pacid=50632099... 0.03 OrthoFinder output from all 47 species
Ceric.05G026100.1 Ceric.05G026100 not classified & original description: pacid=50577264... 0.04 OrthoFinder output from all 47 species
Ceric.07G081900.1 Ceric.07G081900 not classified & original description: pacid=50627936... 0.03 OrthoFinder output from all 47 species
Ceric.09G087400.1 Ceric.09G087400 not classified & original description: pacid=50586781... 0.03 OrthoFinder output from all 47 species
Ceric.11G015200.1 Ceric.11G015200 not classified & original description: pacid=50595684... 0.02 OrthoFinder output from all 47 species
Ceric.13G019600.1 Ceric.13G019600 not classified & original description: pacid=50636734... 0.04 OrthoFinder output from all 47 species
Ceric.13G076400.1 Ceric.13G076400 not classified & original description: pacid=50635248... 0.03 OrthoFinder output from all 47 species
Ceric.18G060200.1 Ceric.18G060200 not classified & original description: pacid=50621585... 0.03 OrthoFinder output from all 47 species
Ceric.1Z079200.1 CRR22, Ceric.1Z079200 not classified & original description: pacid=50582193... 0.03 OrthoFinder output from all 47 species
Ceric.1Z081600.1 CRR22, Ceric.1Z081600 not classified & original description: pacid=50582216... 0.03 OrthoFinder output from all 47 species
Ceric.23G021700.1 Ceric.23G021700 not classified & original description: pacid=50610576... 0.03 OrthoFinder output from all 47 species
Ceric.26G011100.1 Ceric.26G011100 not classified & original description: pacid=50599840... 0.04 OrthoFinder output from all 47 species
Ceric.26G016100.1 OTP84, Ceric.26G016100 not classified & original description: pacid=50599360... 0.03 OrthoFinder output from all 47 species
Ceric.27G069000.1 Ceric.27G069000 not classified & original description: pacid=50605685... 0.04 OrthoFinder output from all 47 species
Ceric.28G029300.1 Ceric.28G029300 not classified & original description: pacid=50569762... 0.03 OrthoFinder output from all 47 species
Ceric.28G044700.1 Ceric.28G044700 not classified & original description: pacid=50570014... 0.03 OrthoFinder output from all 47 species
Ceric.28G059900.1 Ceric.28G059900 not classified & original description: pacid=50569765... 0.03 OrthoFinder output from all 47 species
Ceric.29G051600.1 Ceric.29G051600 not classified & original description: pacid=50625199... 0.03 OrthoFinder output from all 47 species
Ceric.30G033800.1 Ceric.30G033800 not classified & original description: pacid=50608836... 0.03 OrthoFinder output from all 47 species
Ceric.30G037100.1 Ceric.30G037100 not classified & original description: pacid=50608918... 0.02 OrthoFinder output from all 47 species
Ceric.32G042800.1 Ceric.32G042800 not classified & original description: pacid=50598173... 0.03 OrthoFinder output from all 47 species
Ceric.33G057300.1 Ceric.33G057300 not classified & original description: pacid=50607177... 0.03 OrthoFinder output from all 47 species
Ceric.39G022100.1 Ceric.39G022100 not classified & original description: pacid=50582510... 0.02 OrthoFinder output from all 47 species
Dac_g12450 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g28706 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g03284 DOT4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g05785 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g09819 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g23401 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g25985 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g28151 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g38238 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g24725 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01000719001 OSB1 Cell cycle.organelle machineries.DNA... 0.02 OrthoFinder output from all 47 species
GSVIVT01008407001 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
GSVIVT01030836001 No alias Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Gb_33439 REME1 Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
LOC_Os03g08680.1 LOC_Os03g08680 Pentatricopeptide repeat-containing protein DOT4,... 0.02 OrthoFinder output from all 47 species
Len_g05143 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g12777 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18942 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g54965 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g04970 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06230 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06276 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07382 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g09759 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g24085 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g28173 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10138132g0010 No alias Pentatricopeptide repeat-containing protein At3g02330,... 0.02 OrthoFinder output from all 47 species
MA_615077g0010 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.02 OrthoFinder output from all 47 species
MA_8868720g0010 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.02 OrthoFinder output from all 47 species
Msp_g17747 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g26145 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28517 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g05482 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g10472 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g15169 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g15408 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g16039 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g20199 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g20341 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g44630 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g02370 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g06871 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g25357 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g33886 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g34877 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g02574 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g04292 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g06978 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g13434 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g14870 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g32476 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g57545 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57551 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63476 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63500 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g63613 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63633 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63833 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g64725 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g65306 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g03847 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g15493 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g19871 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g20888 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g48447 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0057.g014790 No alias not classified & original description: CDS=1-2049 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0068.g016434 No alias not classified & original description: CDS=1-1746 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0109.g020573 No alias not classified & original description: CDS=184-1233 0.03 OrthoFinder output from all 47 species
Sam_g13748 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g114010.3.1 Solyc03g114010 Pentatricopeptide repeat-containing protein At2g29760,... 0.03 OrthoFinder output from all 47 species
Solyc06g048900.1.1 Solyc06g048900 Pentatricopeptide repeat-containing protein At2g40720... 0.04 OrthoFinder output from all 47 species
Solyc06g064600.1.1 Solyc06g064600 Pentatricopeptide repeat-containing protein At1g56690,... 0.02 OrthoFinder output from all 47 species
Solyc07g009220.2.1 Solyc07g009220 Pentatricopeptide repeat-containing protein At2g34400... 0.02 OrthoFinder output from all 47 species
Spa_g08093 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g15737 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g23705 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g33660 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006528 asparagine metabolic process IEP HCCA
BP GO:0006529 asparagine biosynthetic process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
BP GO:0009067 aspartate family amino acid biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 329 352
IPR002885 Pentatricopeptide_repeat 227 249
IPR002885 Pentatricopeptide_repeat 150 197
IPR002885 Pentatricopeptide_repeat 355 401
IPR002885 Pentatricopeptide_repeat 253 299
IPR002885 Pentatricopeptide_repeat 457 503
IPR002885 Pentatricopeptide_repeat 559 606
No external refs found!