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  5. Ppi_g05840

Ppi_g05840


Description : component *(COG8) of COG (Conserved-Oligomeric Golgi) complex & original description: none


Gene families : OG0005883 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005883_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g05840
Cluster HCCA: Cluster_190

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene08972.t1 Aspi01Gene08972 component *(COG8) of COG (Conserved-Oligomeric Golgi)... 0.03 OrthoFinder output from all 47 species
Azfi_s0003.g007595 No alias component *(COG8) of COG (Conserved-Oligomeric Golgi)... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000144.48 No alias Vesicle trafficking.target membrane tethering.COG... 0.01 OrthoFinder output from all 47 species
Cre10.g439650 No alias Vesicle trafficking.target membrane tethering.COG... 0.02 OrthoFinder output from all 47 species
Dcu_g06307 No alias component *(COG8) of COG (Conserved-Oligomeric Golgi)... 0.06 OrthoFinder output from all 47 species
Gb_37671 No alias component COG8 of COG (Conserved-Oligomeric Golgi) complex 0.03 OrthoFinder output from all 47 species
LOC_Os12g35290.1 LOC_Os12g35290 component COG8 of COG (Conserved-Oligomeric Golgi) complex 0.04 OrthoFinder output from all 47 species
Lfl_g01731 No alias component *(COG8) of COG (Conserved-Oligomeric Golgi)... 0.03 OrthoFinder output from all 47 species
MA_341112g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp4g05520.1 No alias component COG8 of COG (Conserved-Oligomeric Golgi) complex 0.01 OrthoFinder output from all 47 species
Ore_g17416 No alias component *(COG8) of COG (Conserved-Oligomeric Golgi)... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0109.g020550 No alias component *(COG8) of COG (Conserved-Oligomeric Golgi)... 0.02 OrthoFinder output from all 47 species
Sam_g19253 No alias component *(COG8) of COG (Conserved-Oligomeric Golgi)... 0.02 OrthoFinder output from all 47 species
Solyc01g087650.4.1 Solyc01g087650 component COG8 of COG (Conserved-Oligomeric Golgi) complex 0.02 OrthoFinder output from all 47 species
Spa_g00463 No alias component *(COG8) of COG (Conserved-Oligomeric Golgi)... 0.03 OrthoFinder output from all 47 species
Zm00001e038824_P001 Zm00001e038824 component COG8 of COG (Conserved-Oligomeric Golgi) complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0017119 Golgi transport complex IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003724 RNA helicase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006810 transport IEP HCCA
MF GO:0008186 ATP-dependent activity, acting on RNA IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016197 endosomal transport IEP HCCA
BP GO:0016482 cytosolic transport IEP HCCA
BP GO:0042147 retrograde transport, endosome to Golgi IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR007255 COG8 17 350
No external refs found!