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  5. Ppi_g05803

Ppi_g05803


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g05803

Target Alias Description ECC score Gene Family Method Actions
AT2G01510 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g113540 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g30861 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g31006 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g19032 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26680 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08870 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g21473 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g38925 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g43685 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g68110 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene25991.t2 Aspi01Gene25991 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene67429.t2 Aspi01Gene67429 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0001.g000999 No alias not classified & original description: CDS=128-2962 0.04 OrthoFinder output from all 47 species
Cba_g06233 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g19896 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g74872 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.07G078100.1 OTP84, Ceric.07G078100 not classified & original description: pacid=50626860... 0.04 OrthoFinder output from all 47 species
Ceric.07G098300.1 CRR22, Ceric.07G098300 not classified & original description: pacid=50626946... 0.04 OrthoFinder output from all 47 species
Ceric.10G007000.1 Ceric.10G007000 not classified & original description: pacid=50613077... 0.04 OrthoFinder output from all 47 species
Ceric.11G067400.1 Ceric.11G067400 not classified & original description: pacid=50595438... 0.03 OrthoFinder output from all 47 species
Ceric.18G077100.1 Ceric.18G077100 not classified & original description: pacid=50621411... 0.03 OrthoFinder output from all 47 species
Ceric.33G061000.1 OTP84, Ceric.33G061000 not classified & original description: pacid=50606666... 0.04 OrthoFinder output from all 47 species
Dac_g24752 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g10840 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g12270 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01033389001 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Gb_17428 No alias Pentatricopeptide repeat-containing protein At4g04370... 0.03 OrthoFinder output from all 47 species
Gb_18015 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.03 OrthoFinder output from all 47 species
Gb_33693 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
LOC_Os01g15530.1 LOC_Os01g15530 Pentatricopeptide repeat-containing protein At5g56310... 0.02 OrthoFinder output from all 47 species
LOC_Os06g30940.1 LOC_Os06g30940 Pentatricopeptide repeat-containing protein At3g53360,... 0.02 OrthoFinder output from all 47 species
LOC_Os08g06490.2 SLO1, LOC_Os08g06490 Pentatricopeptide repeat-containing protein At4g22760... 0.03 OrthoFinder output from all 47 species
LOC_Os12g30620.1 LOC_Os12g30620 Pentatricopeptide repeat-containing protein At3g29230... 0.03 OrthoFinder output from all 47 species
Len_g03869 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g04332 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g04361 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g04815 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g12152 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g17553 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g17755 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18274 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18579 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g18585 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18968 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g18982 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g40999 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g44152 OTP86 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g59273 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g14546 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_465411g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
MA_511569g0010 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.02 OrthoFinder output from all 47 species
Msp_g22620 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28108 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g17180 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g30620 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g18475 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53388 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0012.g005639 No alias CDP-diacylglycerol phosphatidylserine synthase &... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006120 No alias ssDNA-binding protein *(OSB) & original description: CDS=52-378 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0059.g015029 No alias not classified & original description: CDS=1-2931 0.02 OrthoFinder output from all 47 species
Smo83339 CRR22 Pentatricopeptide repeat-containing protein At3g12770... 0.02 OrthoFinder output from all 47 species
Solyc11g006700.1.1 Solyc11g006700 Pentatricopeptide repeat-containing protein At5g04780,... 0.03 OrthoFinder output from all 47 species
Spa_g14009 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g14568 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g15000 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g23982 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g25320 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g44142 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g45045 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g56147 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g56457 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 249 275
IPR002885 Pentatricopeptide_repeat 49 75
IPR002885 Pentatricopeptide_repeat 77 107
IPR002885 Pentatricopeptide_repeat 150 170
IPR002885 Pentatricopeptide_repeat 452 476
IPR002885 Pentatricopeptide_repeat 178 222
IPR002885 Pentatricopeptide_repeat 378 424
IPR002885 Pentatricopeptide_repeat 277 323
IPR046848 E_motif 496 530
No external refs found!