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  5. Ppi_g05686

Ppi_g05686 (ATMC1, LOL3, MCP1B,...)


Aliases : ATMC1, LOL3, MCP1B, MC1, ATMCPB1

Description : programmed cell death metacaspase-like regulator *(MCP1) & original description: none


Gene families : OG0001440 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001440_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g05686
Cluster HCCA: Cluster_152

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01013841001 ATMC1, LOL3,... Multi-process regulation.programmed cell death.MCP1... 0.02 OrthoFinder output from all 47 species
LOC_Os03g27120.1 ATMC1, LOL3,... MCP1 programmed cell death metacaspase-like regulator 0.02 OrthoFinder output from all 47 species
LOC_Os03g27190.1 AtMC2, MC2,... MCP1 programmed cell death metacaspase-like regulator 0.01 OrthoFinder output from all 47 species
Msp_g37574 ATMC1, LOL3,... programmed cell death metacaspase-like regulator *(MCP1)... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0144.g022941 ATMC1, LOL3,... programmed cell death metacaspase-like regulator *(MCP1)... 0.02 OrthoFinder output from all 47 species
Solyc01g105320.4.1 ATMC1, LOL3,... MCP1 programmed cell death metacaspase-like regulator 0.02 OrthoFinder output from all 47 species
Zm00001e001879_P002 ATMC1, LOL3,... MCP1 programmed cell death metacaspase-like regulator 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR005735 Znf_LSD1 22 46
No external refs found!