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  5. Ppi_g05657

Ppi_g05657


Description : squalene-hopene cyclase & original description: none


Gene families : OG0002047 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002047_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g05657
Cluster HCCA: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
Ala_g24829 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g69508 ATLUP2, LUP2 EC_5.4 intramolecular transferase & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene10453.t1 ATLUP2, LUP2,... squalene-hopene cyclase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene24549.t1 ATLUP2, LUP2,... EC_5.4 intramolecular transferase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene24550.t1 Aspi01Gene24550 squalene-hopene cyclase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene24551.t1 ATLUP2, LUP2,... squalene-hopene cyclase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene24552.t1 Aspi01Gene24552 squalene-hopene cyclase & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene36059.t1 ATLUP2, LUP2,... squalene-hopene cyclase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene36061.t1 Aspi01Gene36061 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene36140.t1 Aspi01Gene36140 squalene-hopene cyclase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene63174.t1 ATLUP2, LUP2,... EC_5.4 intramolecular transferase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene63178.t1 Aspi01Gene63178 EC_5.4 intramolecular transferase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene63179.t1 Aspi01Gene63179 EC_5.4 intramolecular transferase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene63185.t1 Aspi01Gene63185 squalene-hopene cyclase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene63187.t1 ATLUP2, LUP2,... EC_5.4 intramolecular transferase & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05266 ATLUP2, LUP2 EC_5.4 intramolecular transferase & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g19102 ATLUP2, LUP2 EC_5.4 intramolecular transferase & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g31336 ATLUP2, LUP2 EC_5.4 intramolecular transferase & original description: none 0.04 OrthoFinder output from all 47 species
Mp2g20110.1 No alias Dammaradiene synthase OS=Dryopteris crassirhizoma... 0.02 OrthoFinder output from all 47 species
Mp8g14000.1 THAS1, THAS Dammaradiene synthase OS=Dryopteris crassirhizoma... 0.02 OrthoFinder output from all 47 species
Nbi_g30274 No alias squalene-hopene cyclase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g43954 ATLUP2, LUP2 squalene-hopene cyclase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g42034 ATLUP2, LUP2 squalene-hopene cyclase & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0009.g004522 ATLUP2, LUP2 squalene-hopene cyclase & original description: CDS=1-2067 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0018.g007471 ATLUP2, LUP2 squalene-hopene cyclase & original description: CDS=1-2091 0.03 OrthoFinder output from all 47 species
Spa_g37330 ATLUP2, LUP2 squalene-hopene cyclase & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g46323 ATLUP2, LUP2 EC_5.4 intramolecular transferase & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g44706 No alias not classified & original description: none 0.19 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016843 amine-lyase activity IEP HCCA
MF GO:0016844 strictosidine synthase activity IEP HCCA
MF GO:0042393 histone binding IEP HCCA
InterPro domains Description Start Stop
IPR032697 SQ_cyclase_N 1 174
IPR032696 SQ_cyclase_C 184 338
No external refs found!