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  5. LOC_Os10g35760.2

LOC_Os10g35760.2


Description : Pentatricopeptide repeat-containing protein At2g20710, mitochondrial OS=Arabidopsis thaliana (sp|q9sku6|pp166_arath : 277.0)


Gene families : OG_01_0000235 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000235_tree ,
OG_02_0000298 (LandPlants) Phylogenetic Tree(s): OG_02_0000298_tree ,
OG_03_0003159 (SeedPlants) Phylogenetic Tree(s): OG_03_0003159_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os10g35760.2
Cluster HCCA: Cluster_376

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00264580 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g20710,... 0.03 Archaeplastida
AT5G27460 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Archaeplastida
GSVIVT01002065001 No alias Pentatricopeptide repeat-containing protein At4g21705,... 0.03 Archaeplastida
GSVIVT01020533001 No alias Pentatricopeptide repeat-containing protein At2g20710,... 0.03 Archaeplastida
GSVIVT01024964001 No alias Pentatricopeptide repeat-containing protein At1g07590,... 0.03 Archaeplastida
GSVIVT01031246001 No alias Pentatricopeptide repeat-containing protein At4g01990,... 0.05 Archaeplastida
GSVIVT01033642001 No alias Pentatricopeptide repeat-containing protein At1g80270,... 0.03 Archaeplastida
Gb_09452 No alias Pentatricopeptide repeat-containing protein At1g60770... 0.05 Archaeplastida
Gb_14211 No alias Pentatricopeptide repeat-containing protein At1g60770... 0.03 Archaeplastida
Gb_14576 No alias Pentatricopeptide repeat-containing protein At1g60770... 0.02 Archaeplastida
Gb_20238 No alias RNA editing factor (POCO) 0.02 Archaeplastida
Gb_27873 No alias RNA editing factor (POCO) 0.03 Archaeplastida
Gb_38114 No alias RNA editing factor (POCO) 0.03 Archaeplastida
LOC_Os02g55310.1 No alias Pentatricopeptide repeat-containing protein At5g27460... 0.02 Archaeplastida
LOC_Os12g34340.1 No alias Pentatricopeptide repeat-containing protein At4g02820,... 0.03 Archaeplastida
MA_100637g0010 No alias Pentatricopeptide repeat-containing protein At1g60770... 0.04 Archaeplastida
MA_10431989g0010 No alias RNA editing factor (POCO) 0.02 Archaeplastida
MA_10435629g0010 No alias Pentatricopeptide repeat-containing protein At1g60770... 0.03 Archaeplastida
MA_128872g0020 No alias Pentatricopeptide repeat-containing protein At1g02150... 0.03 Archaeplastida
MA_29806g0010 No alias Pentatricopeptide repeat-containing protein At1g60770... 0.02 Archaeplastida
MA_492314g0010 No alias RNA editing factor (POCO) 0.03 Archaeplastida
MA_77400g0010 No alias Pentatricopeptide repeat-containing protein At1g15480,... 0.02 Archaeplastida
MA_777619g0010 No alias Pentatricopeptide repeat-containing protein At1g02150... 0.02 Archaeplastida
MA_94340g0010 No alias Pentatricopeptide repeat-containing protein At1g60770... 0.03 Archaeplastida
Smo413483 No alias Pentatricopeptide repeat-containing protein At1g80270,... 0.03 Archaeplastida
Solyc01g079320.4.1 No alias Pentatricopeptide repeat-containing protein At1g02370,... 0.05 Archaeplastida
Solyc02g078330.3.1 No alias Pentatricopeptide repeat-containing protein At2g20710,... 0.06 Archaeplastida
Solyc07g054090.3.1 No alias Pentatricopeptide repeat-containing protein At2g20710,... 0.02 Archaeplastida
Zm00001e012594_P001 No alias Pentatricopeptide repeat-containing protein At4g21705,... 0.03 Archaeplastida
Zm00001e026211_P002 No alias Pentatricopeptide repeat-containing protein At1g02370,... 0.03 Archaeplastida
Zm00001e033119_P002 No alias RNA editing factor (POCO) 0.04 Archaeplastida
Zm00001e039746_P002 No alias Pentatricopeptide repeat-containing protein At4g02820,... 0.04 Archaeplastida
AMTR_s00009p00264580 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g20710,... 0.03 LandPlants
AT5G27460 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 LandPlants
GSVIVT01002065001 No alias Pentatricopeptide repeat-containing protein At4g21705,... 0.04 LandPlants
GSVIVT01018303001 No alias Pentatricopeptide repeat-containing protein At1g02150... 0.02 LandPlants
GSVIVT01020533001 No alias Pentatricopeptide repeat-containing protein At2g20710,... 0.03 LandPlants
GSVIVT01024495001 No alias Pentatricopeptide repeat-containing protein At4g02820,... 0.02 LandPlants
GSVIVT01031246001 No alias Pentatricopeptide repeat-containing protein At4g01990,... 0.04 LandPlants
Gb_09452 No alias Pentatricopeptide repeat-containing protein At1g60770... 0.04 LandPlants
Gb_14211 No alias Pentatricopeptide repeat-containing protein At1g60770... 0.03 LandPlants
LOC_Os02g55310.1 No alias Pentatricopeptide repeat-containing protein At5g27460... 0.02 LandPlants
LOC_Os12g34340.1 No alias Pentatricopeptide repeat-containing protein At4g02820,... 0.03 LandPlants
MA_100637g0010 No alias Pentatricopeptide repeat-containing protein At1g60770... 0.03 LandPlants
MA_10435629g0010 No alias Pentatricopeptide repeat-containing protein At1g60770... 0.02 LandPlants
MA_128872g0020 No alias Pentatricopeptide repeat-containing protein At1g02150... 0.03 LandPlants
MA_29806g0010 No alias Pentatricopeptide repeat-containing protein At1g60770... 0.02 LandPlants
MA_777619g0010 No alias Pentatricopeptide repeat-containing protein At1g02150... 0.02 LandPlants
MA_94340g0010 No alias Pentatricopeptide repeat-containing protein At1g60770... 0.02 LandPlants
Smo413483 No alias Pentatricopeptide repeat-containing protein At1g80270,... 0.03 LandPlants
Solyc01g079320.4.1 No alias Pentatricopeptide repeat-containing protein At1g02370,... 0.05 LandPlants
Solyc01g100580.3.1 No alias Pentatricopeptide repeat-containing protein At4g01990,... 0.02 LandPlants
Solyc02g078330.3.1 No alias Pentatricopeptide repeat-containing protein At2g20710,... 0.06 LandPlants
Solyc06g005140.3.1 No alias Pentatricopeptide repeat-containing protein At4g02820,... 0.02 LandPlants
Solyc07g054090.3.1 No alias Pentatricopeptide repeat-containing protein At2g20710,... 0.02 LandPlants
Zm00001e012594_P001 No alias Pentatricopeptide repeat-containing protein At4g21705,... 0.03 LandPlants
Zm00001e026211_P002 No alias Pentatricopeptide repeat-containing protein At1g02370,... 0.03 LandPlants
Zm00001e039746_P002 No alias Pentatricopeptide repeat-containing protein At4g02820,... 0.03 LandPlants
AMTR_s00009p00264580 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g20710,... 0.03 SeedPlants
GSVIVT01002065001 No alias Pentatricopeptide repeat-containing protein At4g21705,... 0.03 SeedPlants
GSVIVT01014363001 No alias Pentatricopeptide repeat-containing protein At4g21705,... 0.03 SeedPlants
GSVIVT01020534001 No alias Pentatricopeptide repeat-containing protein At2g20710,... 0.02 SeedPlants
Gb_09452 No alias Pentatricopeptide repeat-containing protein At1g60770... 0.03 SeedPlants
Solyc02g078330.3.1 No alias Pentatricopeptide repeat-containing protein At2g20710,... 0.04 SeedPlants
Zm00001e012594_P001 No alias Pentatricopeptide repeat-containing protein At4g21705,... 0.02 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 366 392
IPR002885 Pentatricopeptide_repeat 153 181
IPR002885 Pentatricopeptide_repeat 184 231
No external refs found!