LOC_Os10g35760.2


Description : Pentatricopeptide repeat-containing protein At2g20710, mitochondrial OS=Arabidopsis thaliana (sp|q9sku6|pp166_arath : 277.0)


Gene families : OG_01_0000235 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000235_tree ,
OG_02_0000298 (LandPlants) Phylogenetic Tree(s): OG_02_0000298_tree ,
OG_03_0003159 (SeedPlants) Phylogenetic Tree(s): OG_03_0003159_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os10g35760.2
Cluster HCCA: Cluster_376

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00264580 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g20710,... 0.03 Archaeplastida
AT5G27460 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Archaeplastida
GSVIVT01002065001 No alias Pentatricopeptide repeat-containing protein At4g21705,... 0.03 Archaeplastida
GSVIVT01020533001 No alias Pentatricopeptide repeat-containing protein At2g20710,... 0.03 Archaeplastida
GSVIVT01024964001 No alias Pentatricopeptide repeat-containing protein At1g07590,... 0.03 Archaeplastida
GSVIVT01031246001 No alias Pentatricopeptide repeat-containing protein At4g01990,... 0.05 Archaeplastida
GSVIVT01033642001 No alias Pentatricopeptide repeat-containing protein At1g80270,... 0.03 Archaeplastida
Gb_09452 No alias Pentatricopeptide repeat-containing protein At1g60770... 0.05 Archaeplastida
Gb_14211 No alias Pentatricopeptide repeat-containing protein At1g60770... 0.03 Archaeplastida
Gb_14576 No alias Pentatricopeptide repeat-containing protein At1g60770... 0.02 Archaeplastida
Gb_20238 No alias RNA editing factor (POCO) 0.02 Archaeplastida
Gb_27873 No alias RNA editing factor (POCO) 0.03 Archaeplastida
Gb_38114 No alias RNA editing factor (POCO) 0.03 Archaeplastida
LOC_Os02g55310.1 No alias Pentatricopeptide repeat-containing protein At5g27460... 0.02 Archaeplastida
LOC_Os12g34340.1 No alias Pentatricopeptide repeat-containing protein At4g02820,... 0.03 Archaeplastida
MA_100637g0010 No alias Pentatricopeptide repeat-containing protein At1g60770... 0.04 Archaeplastida
MA_10431989g0010 No alias RNA editing factor (POCO) 0.02 Archaeplastida
MA_10435629g0010 No alias Pentatricopeptide repeat-containing protein At1g60770... 0.03 Archaeplastida
MA_128872g0020 No alias Pentatricopeptide repeat-containing protein At1g02150... 0.03 Archaeplastida
MA_29806g0010 No alias Pentatricopeptide repeat-containing protein At1g60770... 0.02 Archaeplastida
MA_492314g0010 No alias RNA editing factor (POCO) 0.03 Archaeplastida
MA_77400g0010 No alias Pentatricopeptide repeat-containing protein At1g15480,... 0.02 Archaeplastida
MA_777619g0010 No alias Pentatricopeptide repeat-containing protein At1g02150... 0.02 Archaeplastida
MA_94340g0010 No alias Pentatricopeptide repeat-containing protein At1g60770... 0.03 Archaeplastida
Smo413483 No alias Pentatricopeptide repeat-containing protein At1g80270,... 0.03 Archaeplastida
Solyc01g079320.4.1 No alias Pentatricopeptide repeat-containing protein At1g02370,... 0.05 Archaeplastida
Solyc02g078330.3.1 No alias Pentatricopeptide repeat-containing protein At2g20710,... 0.06 Archaeplastida
Solyc07g054090.3.1 No alias Pentatricopeptide repeat-containing protein At2g20710,... 0.02 Archaeplastida
Zm00001e012594_P001 No alias Pentatricopeptide repeat-containing protein At4g21705,... 0.03 Archaeplastida
Zm00001e026211_P002 No alias Pentatricopeptide repeat-containing protein At1g02370,... 0.03 Archaeplastida
Zm00001e033119_P002 No alias RNA editing factor (POCO) 0.04 Archaeplastida
Zm00001e039746_P002 No alias Pentatricopeptide repeat-containing protein At4g02820,... 0.04 Archaeplastida
AMTR_s00009p00264580 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g20710,... 0.03 LandPlants
AT5G27460 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 LandPlants
GSVIVT01002065001 No alias Pentatricopeptide repeat-containing protein At4g21705,... 0.04 LandPlants
GSVIVT01018303001 No alias Pentatricopeptide repeat-containing protein At1g02150... 0.02 LandPlants
GSVIVT01020533001 No alias Pentatricopeptide repeat-containing protein At2g20710,... 0.03 LandPlants
GSVIVT01024495001 No alias Pentatricopeptide repeat-containing protein At4g02820,... 0.02 LandPlants
GSVIVT01031246001 No alias Pentatricopeptide repeat-containing protein At4g01990,... 0.04 LandPlants
Gb_09452 No alias Pentatricopeptide repeat-containing protein At1g60770... 0.04 LandPlants
Gb_14211 No alias Pentatricopeptide repeat-containing protein At1g60770... 0.03 LandPlants
LOC_Os02g55310.1 No alias Pentatricopeptide repeat-containing protein At5g27460... 0.02 LandPlants
LOC_Os12g34340.1 No alias Pentatricopeptide repeat-containing protein At4g02820,... 0.03 LandPlants
MA_100637g0010 No alias Pentatricopeptide repeat-containing protein At1g60770... 0.03 LandPlants
MA_10435629g0010 No alias Pentatricopeptide repeat-containing protein At1g60770... 0.02 LandPlants
MA_128872g0020 No alias Pentatricopeptide repeat-containing protein At1g02150... 0.03 LandPlants
MA_29806g0010 No alias Pentatricopeptide repeat-containing protein At1g60770... 0.02 LandPlants
MA_777619g0010 No alias Pentatricopeptide repeat-containing protein At1g02150... 0.02 LandPlants
MA_94340g0010 No alias Pentatricopeptide repeat-containing protein At1g60770... 0.02 LandPlants
Smo413483 No alias Pentatricopeptide repeat-containing protein At1g80270,... 0.03 LandPlants
Solyc01g079320.4.1 No alias Pentatricopeptide repeat-containing protein At1g02370,... 0.05 LandPlants
Solyc01g100580.3.1 No alias Pentatricopeptide repeat-containing protein At4g01990,... 0.02 LandPlants
Solyc02g078330.3.1 No alias Pentatricopeptide repeat-containing protein At2g20710,... 0.06 LandPlants
Solyc06g005140.3.1 No alias Pentatricopeptide repeat-containing protein At4g02820,... 0.02 LandPlants
Solyc07g054090.3.1 No alias Pentatricopeptide repeat-containing protein At2g20710,... 0.02 LandPlants
Zm00001e012594_P001 No alias Pentatricopeptide repeat-containing protein At4g21705,... 0.03 LandPlants
Zm00001e026211_P002 No alias Pentatricopeptide repeat-containing protein At1g02370,... 0.03 LandPlants
Zm00001e039746_P002 No alias Pentatricopeptide repeat-containing protein At4g02820,... 0.03 LandPlants
AMTR_s00009p00264580 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g20710,... 0.03 SeedPlants
GSVIVT01002065001 No alias Pentatricopeptide repeat-containing protein At4g21705,... 0.03 SeedPlants
GSVIVT01014363001 No alias Pentatricopeptide repeat-containing protein At4g21705,... 0.03 SeedPlants
GSVIVT01020534001 No alias Pentatricopeptide repeat-containing protein At2g20710,... 0.02 SeedPlants
Gb_09452 No alias Pentatricopeptide repeat-containing protein At1g60770... 0.03 SeedPlants
Solyc02g078330.3.1 No alias Pentatricopeptide repeat-containing protein At2g20710,... 0.04 SeedPlants
Zm00001e012594_P001 No alias Pentatricopeptide repeat-containing protein At4g21705,... 0.02 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 366 392
IPR002885 Pentatricopeptide_repeat 153 181
IPR002885 Pentatricopeptide_repeat 184 231
No external refs found!