Ppi_g05329


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g05329

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00129p00082590 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g19720... 0.03 OrthoFinder output from all 47 species
AT3G28660 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g002514 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g069195 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g13795 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g21708 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g23669 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g33525 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g44810 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g48795 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g06813 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g14569 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g16990 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g17652 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g36021 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g36976 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05114 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06390 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06831 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07140 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07500 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19283 CRR2 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g29342 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30901 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g55221 VAC1, ECB2, ATECB2 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g60956 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g13913 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27584 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g27606 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g28686 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16322 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g18732 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g20814 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g30802 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene00921.t1 CRR2, Aspi01Gene00921 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene22875.t1 Aspi01Gene22875 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene41281.t1 OTP84, Aspi01Gene41281 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene56416.t1 CRR22, Aspi01Gene56416 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0036.g025743 No alias not classified & original description: CDS=1-2553 0.03 OrthoFinder output from all 47 species
Cba_g03375 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g05315 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06449 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g06583 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g07679 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07730 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g07735 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g19886 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g20884 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g21792 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29696 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g45942 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g67690 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g76750 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g77255 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.09G007000.1 Ceric.09G007000 not classified & original description: pacid=50586983... 0.03 OrthoFinder output from all 47 species
Ceric.10G031500.1 OTP84, Ceric.10G031500 not classified & original description: pacid=50611993... 0.03 OrthoFinder output from all 47 species
Ceric.15G008800.1 Ceric.15G008800 not classified & original description: pacid=50639552... 0.02 OrthoFinder output from all 47 species
Ceric.23G032000.1 Ceric.23G032000 not classified & original description: pacid=50611416... 0.02 OrthoFinder output from all 47 species
Ceric.34G039000.1 Ceric.34G039000 not classified & original description: pacid=50623583... 0.03 OrthoFinder output from all 47 species
Dac_g04705 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g05153 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g05750 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g16356 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g21033 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g28478 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g30284 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g36002 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g06501 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g07141 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08224 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08601 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g38524 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g39633 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g40896 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g10204 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g10840 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g26344 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g46247 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g48258 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g49752 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01015521001 No alias Pentatricopeptide repeat-containing protein At4g32430,... 0.02 OrthoFinder output from all 47 species
GSVIVT01032950001 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.04 OrthoFinder output from all 47 species
GSVIVT01033389001 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
GSVIVT01037377001 OTP82 Pentatricopeptide repeat-containing protein At1g08070,... 0.03 OrthoFinder output from all 47 species
LOC_Os01g42280.1 CRR21, LOC_Os01g42280 RNA editing factor (CRR21) 0.03 OrthoFinder output from all 47 species
LOC_Os07g07620.1 emb1899, EMB175,... Pentatricopeptide repeat-containing protein At5g03800... 0.04 OrthoFinder output from all 47 species
LOC_Os09g34870.1 LOC_Os09g34870 Pentatricopeptide repeat-containing protein At2g36980,... 0.03 OrthoFinder output from all 47 species
LOC_Os12g08140.1 LOC_Os12g08140 Pentatricopeptide repeat-containing protein At2g33760... 0.03 OrthoFinder output from all 47 species
Len_g18566 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g43453 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g04754 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g05656 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06094 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g06686 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06730 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07121 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07379 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07766 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07816 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g30026 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g32670 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g33292 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g07777 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g14470 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g28772 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g40957 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g48905 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g10308 EMB2261 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g15839 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g21177 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g24066 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g24068 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g25474 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g44738 VAC1, ECB2, ATECB2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g01804 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g04708 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g09754 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g10959 OTP82 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g14351 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g16678 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g29795 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g38356 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g40875 OTP82 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g03298 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g03356 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g11374 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12182 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12988 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13480 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g16626 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g18003 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g20232 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g35608 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g41187 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63650 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g11224 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g15475 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g22252 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g11526 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g22205 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29583 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g30547 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g32582 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g54364 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g06501 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g13872 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g20091 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g26050 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g26517 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g45048 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g49347 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g53704 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g56258 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g57126 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g04591 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g04750 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g05655 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06102 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06527 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g10336 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g16806 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g19341 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g20369 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g22999 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g23117 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g30138 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g44640 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0010181 FMN binding IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 422 443
IPR002885 Pentatricopeptide_repeat 216 238
IPR002885 Pentatricopeptide_repeat 830 852
IPR002885 Pentatricopeptide_repeat 626 648
IPR002885 Pentatricopeptide_repeat 858 886
IPR002885 Pentatricopeptide_repeat 892 919
IPR002885 Pentatricopeptide_repeat 550 596
IPR002885 Pentatricopeptide_repeat 754 800
IPR002885 Pentatricopeptide_repeat 241 288
IPR002885 Pentatricopeptide_repeat 141 186
IPR002885 Pentatricopeptide_repeat 651 691
IPR002885 Pentatricopeptide_repeat 343 390
IPR002885 Pentatricopeptide_repeat 448 494
No external refs found!