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  5. Ppi_g05221

Ppi_g05221


Description : not classified & original description: none


Gene families : OG0001937 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001937_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g05221

Target Alias Description ECC score Gene Family Method Actions
Adi_g014862 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0003.g007928 No alias not classified & original description: CDS=113-1447 0.03 OrthoFinder output from all 47 species
LOC_Os03g48260.1 LOC_Os03g48260 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_83516g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g07689 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g11362 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g13493 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g38326 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e012268_P003 Zm00001e012268 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!