Zm00001d025948 (GRMZM2G123719)


Aliases : GRMZM2G123719

Description : 29.2.4 protein.synthesis.elongation Nuclear encoded protein consists of the five domains conserved in EF-G proteins, with two GTP-binding sites in the first domain, and an additional transit peptide at the N-terminus. Localized in chloroplasts. Point mutation results in a delay in the onset of germination. At early developmental stage embryos still contain undifferentiated proplastids. The greening of cotyledons is severely impaired in light-grown mutant sco1 seedlings, whereas the following true leaves develop normally as in wild-type plants. SNOWY COTYLEDON 1 (SCO1)


Gene families : OG_01_0001639 (Gene family) Phylogenetic Tree(s): OG0001639_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d025948
Cluster HCCA cluster: Cluster_246

Target Alias Description ECC score Gene Family Method Actions
AT1G62750 ATSCO1/CPEF-G,... Translation elongation factor EFG/EF2 protein 0.08 Gene family
Cre11.g467553 No alias 29.2.4 protein.synthesis.elongation Translation... 0.03 Gene family
GSVIVT01006035001 No alias 29.2.4 protein.synthesis.elongation Nuclear encoded... 0.07 Gene family
LOC_Os04g45490 Os04g0538100,... 29.2.4 protein.synthesis.elongation Nuclear encoded... 0.09 Gene family
Solyc08g079180.3.1 Solyc08g079180.3 29.2.4 protein.synthesis.elongation Nuclear encoded... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR004161 EFTu-like_2 394 461
IPR000640 EFG_V-like 670 757
IPR000795 TF_GTP-bd_dom 79 351
IPR005517 Transl_elong_EFG/EF2_IV 549 667
No external refs found!