Ppi_g05179


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g05179

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00252600 MEF1 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
AMTR_s00029p00235510 OTP84,... Pentatricopeptide repeat-containing protein DOT4,... 0.02 OrthoFinder output from all 47 species
AMTR_s00092p00078040 No alias Pentatricopeptide repeat-containing protein At4g35130,... 0.03 OrthoFinder output from all 47 species
AT1G77170 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT3G24000 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g004061 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g004418 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g005549 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g005755 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g023027 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g049842 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g056630 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g060846 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g108176 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g07273 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g30800 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g17095 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene00588.t1 Aspi01Gene00588 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene16353.t1 Aspi01Gene16353 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene34786.t1 Aspi01Gene34786 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0049.g030697 No alias not classified & original description: CDS=1-2361 0.02 OrthoFinder output from all 47 species
Cba_g07750 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g31685 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g34541 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g67468 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.1Z254100.1 Ceric.1Z254100 not classified & original description: pacid=50632850... 0.02 OrthoFinder output from all 47 species
Ceric.28G001700.1 Ceric.28G001700 not classified & original description: pacid=50570577... 0.02 OrthoFinder output from all 47 species
Dac_g00755 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g18422 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g10759 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g25197 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g46795 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02726 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g15613 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g26542 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01033348001 No alias Cellular respiration.oxidative phosphorylation.NADH... 0.02 OrthoFinder output from all 47 species
Gb_34736 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species
Len_g14977 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18501 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g30657 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g03167 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g14854 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28724 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g03998 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g12690 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g21816 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g01995 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g30628 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002433 No alias EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Sam_g05036 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g07050 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g11676 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g12246 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g17711 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g36238 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g40765 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g49086 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo99677 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
Solyc03g114660.1.1 Solyc03g114660 Pentatricopeptide repeat-containing protein At1g18485... 0.02 OrthoFinder output from all 47 species
Solyc10g005090.3.1 Solyc10g005090 Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
Spa_g29657 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g05854 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g10295 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g17632 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g23468 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g30218 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0005488 binding IEP HCCA
BP GO:0006099 tricarboxylic acid cycle IEP HCCA
MF GO:0043169 cation binding IEP HCCA
CC GO:0045273 respiratory chain complex II IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
CC GO:0098803 respiratory chain complex IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 453 478
IPR002885 Pentatricopeptide_repeat 251 273
IPR002885 Pentatricopeptide_repeat 174 221
IPR002885 Pentatricopeptide_repeat 379 425
IPR002885 Pentatricopeptide_repeat 72 119
IPR002885 Pentatricopeptide_repeat 277 323
No external refs found!