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  5. Ppi_g05162

Ppi_g05162


Description : GARP subgroup HHO transcription factor & original description: none


Gene families : OG0001052 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001052_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g05162
Cluster HCCA: Cluster_235

Target Alias Description ECC score Gene Family Method Actions
AT1G13300 HRS1 myb-like transcription factor family protein 0.04 OrthoFinder output from all 47 species
AT3G25790 No alias myb-like transcription factor family protein 0.03 OrthoFinder output from all 47 species
Adi_g019107 No alias GARP subgroup HHO transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ala_g23352 No alias GARP subgroup HHO transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene53882.t1 Aspi01Gene53882 GARP subgroup HHO transcription factor & original... 0.03 OrthoFinder output from all 47 species
Cba_g22464 No alias GARP subgroup HHO transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.21G045700.1 Ceric.21G045700 GARP subgroup HHO transcription factor & original... 0.06 OrthoFinder output from all 47 species
Ehy_g02562 No alias GARP subgroup HHO transcription factor & original... 0.03 OrthoFinder output from all 47 species
Lfl_g03258 No alias GARP subgroup HHO transcription factor & original... 0.02 OrthoFinder output from all 47 species
MA_541749g0010 No alias G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Sam_g37435 No alias GARP subgroup HHO transcription factor & original... 0.03 OrthoFinder output from all 47 species
Solyc02g090400.4.1 Solyc02g090400 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
Solyc12g006800.2.1 Solyc12g006800 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0004866 endopeptidase inhibitor activity IEP HCCA
MF GO:0004869 cysteine-type endopeptidase inhibitor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030414 peptidase inhibitor activity IEP HCCA
MF GO:0061134 peptidase regulator activity IEP HCCA
MF GO:0061135 endopeptidase regulator activity IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 260 311
No external refs found!