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  5. Ppi_g05109

Ppi_g05109


Description : not classified & original description: none


Gene families : OG0001514 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001514_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g05109
Cluster HCCA: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
Adi_g019503 WTF1, AtWTF1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g056854 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g088467 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g18610 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene54162.t1 Aspi01Gene54162 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.24G018700.1 Ceric.24G018700 not classified & original description: pacid=50629155... 0.03 OrthoFinder output from all 47 species
LOC_Os02g32540.1 LOC_Os02g32540 no description available(sp|q9zuz6|wtf9_arath : 134.0) 0.02 OrthoFinder output from all 47 species
LOC_Os06g15550.1 LOC_Os06g15550 Protein WHATS THIS FACTOR 1 homolog OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Nbi_g08348 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g09755 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0042.g012790 WTF1, AtWTF1 not classified & original description: CDS=136-1443 0.03 OrthoFinder output from all 47 species
Zm00001e014695_P001 Zm00001e014695 no description available(sp|q9zuz6|wtf9_arath : 128.0) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030118 clathrin coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030125 clathrin vesicle coat IEP HCCA
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP HCCA
CC GO:0030132 clathrin coat of coated pit IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
InterPro domains Description Start Stop
IPR021099 PORR_domain 38 369
No external refs found!