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  5. Ppi_g05082

Ppi_g05082 (ERD2B)


Aliases : ERD2B

Description : COPI trafficking K/HDEL-signature cargo receptor & original description: none


Gene families : OG0002105 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002105_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g05082
Cluster HCCA: Cluster_145

Target Alias Description ECC score Gene Family Method Actions
AT3G25040 ERD2B endoplasmic reticulum retention defective 2B 0.05 OrthoFinder output from all 47 species
Ala_g07087 ERD2B COPI trafficking K/HDEL-signature cargo receptor &... 0.05 OrthoFinder output from all 47 species
Aop_g35378 ERD2B COPI trafficking K/HDEL-signature cargo receptor &... 0.03 OrthoFinder output from all 47 species
Ceric.08G005400.1 ERD2B, Ceric.08G005400 COPI trafficking K/HDEL-signature cargo receptor &... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000829.17 ERD2B Vesicle trafficking.Coat protein I (COPI) coatomer... 0.02 OrthoFinder output from all 47 species
Cre01.g051400 ERD2B Vesicle trafficking.Coat protein I (COPI) coatomer... 0.01 OrthoFinder output from all 47 species
LOC_Os04g30800.2 ERD2B, LOC_Os04g30800 ERD2 COPI trafficking K/HDEL-signature receptor 0.04 OrthoFinder output from all 47 species
Len_g00374 ERD2B COPI trafficking K/HDEL-signature cargo receptor &... 0.04 OrthoFinder output from all 47 species
MA_20587g0010 ERD2B ERD2 COPI trafficking K/HDEL-signature receptor 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0138.g022588 ERD2B COPI trafficking K/HDEL-signature cargo receptor &... 0.03 OrthoFinder output from all 47 species
Smo75833 ERD2B Vesicle trafficking.Coat protein I (COPI) coatomer... 0.07 OrthoFinder output from all 47 species
Solyc09g091900.4.1 ERD2B, Solyc09g091900 ERD2 COPI trafficking K/HDEL-signature receptor 0.1 OrthoFinder output from all 47 species
Spa_g25735 ERD2B COPI trafficking K/HDEL-signature cargo receptor &... 0.03 OrthoFinder output from all 47 species
Tin_g05413 ERD2B COPI trafficking K/HDEL-signature cargo receptor &... 0.03 OrthoFinder output from all 47 species
Zm00001e008905_P001 ERD2B, Zm00001e008905 ERD2 COPI trafficking K/HDEL-signature receptor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006621 protein retention in ER lumen IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0046923 ER retention sequence binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0006457 protein folding IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
InterPro domains Description Start Stop
IPR000133 ER_ret_rcpt 28 171
No external refs found!